PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00045.1.g01190.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 216aa    MW: 23561.6 Da    PI: 9.8764
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00045.1.g01190.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.7e-191563153
                           AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                                  ++++GVr+++ +g+Wv+eIr+p        +r++lg+f taeeAa+a+++a+  +
  Zjn_sc00045.1.g01190.1.am.mk 15 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARAYDEAAVLM 63
                                  59*******9.**********8.....334*********************9765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.51E-321575No hitNo description
SuperFamilySSF541711.9E-201674IPR016177DNA-binding domain
PfamPF008477.7E-121660IPR001471AP2/ERF domain
PROSITE profilePS5103221.8781673IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.1E-331674IPR001471AP2/ERF domain
SMARTSM003808.9E-391679IPR001471AP2/ERF domain
PRINTSPR003671.3E-101728IPR001471AP2/ERF domain
PRINTSPR003671.3E-103955IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009414Biological Processresponse to water deprivation
GO:0010143Biological Processcutin biosynthetic process
GO:0010166Biological Processwax metabolic process
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MGVENLYSKK MVQPKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFETAE EAARAYDEAA  60
VLMSGRNAKT NFPVQRSTTG EPAPTAGRDV RSKGSGSSST ANLSQILSAK LRKCCKAPSP  120
SLTCLRLDPE KSHIGVWQKR AGARADSNWV MTVELNKEAV STDAAAQSTS AVTASPATTV  180
DDEERIALQM IEELLSRSSP VSPSHGHGDD DGQFVI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-161581470ATERF1
3gcc_A1e-161581470ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004951533.11e-132PREDICTED: ethylene-responsive transcription factor WIN1-like
SwissprotQ9XI332e-79WIN1_ARATH; Ethylene-responsive transcription factor WIN1
TrEMBLA0A0A9FMS81e-130A0A0A9FMS8_ARUDO; Uncharacterized protein
TrEMBLA0A0A9KL511e-131A0A0A9KL51_ARUDO; Uncharacterized protein
STRINGGRMZM2G085678_P011e-128(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37173876
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.19e-62ERF family protein