PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00029.1.g00900.1.sm.mkhc
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 375aa    MW: 40628.6 Da    PI: 9.5072
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00029.1.g00900.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_168.41.2e-21220282163
                                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                                     +ke+krerrkq+NRe+ArrsR+RK+ae+eeL++kv+ ++aeN++L++e+++l++ ++klk+e+
  Zjn_sc00029.1.g00900.1.sm.mkhc 220 DKESKRERRKQSNRESARRSRLRKQAETEELARKVELMTAENTSLRNEINKLSESSQKLKMEN 282
                                     689**********************************************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.8E-22189IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1708.5E-17217279No hitNo description
SMARTSM003384.1E-20220284IPR004827Basic-leucine zipper domain
PfamPF001701.0E-19221282IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.288222285IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.13E-11224279No hitNo description
CDDcd147024.74E-21225273No hitNo description
PROSITE patternPS000360227242IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MGHDEAVVTQ ISGKAPSPAK DQPATFPYLD WSAMQSYYGP GILPPAFFNP GHVPSPFMWA  60
PQNLSTAAFG KPYAAIYPHA GGFLHPFMPL MVNPLNAEPA MSVNSKDNSL NKKMKETDGT  120
AVSTGSGNSE KTSGDYSVEG SSDGNNQRAC GTPKKRTIDD MTTSETCGAS ILNDKPREPG  180
RSTTLANVCI PDAAVKPCAS TGSDFRVSGA QSTEWPTKDD KESKRERRKQ SNRESARRSR  240
LRKQAETEEL ARKVELMTAE NTSLRNEINK LSESSQKLKM ENSALMVQRG LTEFSSPYLS  300
FTMPHFSDAP DIAGETEGKR NRRRSACGPN SRRAVTNFLS MMTGAGAPRH MEHGAPKLRQ  360
LVGSGPLPAD VVAAR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1236242RRSRLRK
2236243RRSRLRKQ
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU4399380.0EU439938.1 Eleusine coracana cultivar GPU28 G-box binding factor 3 (GBF3) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021310900.11e-177G-box-binding factor 3-like
TrEMBLD2CP300.0D2CP30_ELECO; G-box binding factor 3
STRINGSb03g030050.11e-177(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.24e-44G-box binding factor 3