PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00012.1.g01140.1.am.mkhc
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 422aa    MW: 45126.5 Da    PI: 8.1047
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00012.1.g01140.1.am.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_163.73.4e-20285347163
                                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                                     e+elk e+rk +NRe+ArrsR RK+ae+eeL++ v++L++eN +Lk+e+++l++ ++kl+ e+
  Zjn_sc00012.1.g01140.1.am.mkhc 285 ERELKHEKRKVSNRESARRSRMRKQAETEELATQVESLTQENVSLKSEISRLTNSSEKLRLEN 347
                                     89*********************************************************9887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.7E-2749140IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1705.2E-17280344No hitNo description
PfamPF001702.3E-18285347IPR004827Basic-leucine zipper domain
SMARTSM003384.4E-20285349IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.702287350IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.88E-11289343No hitNo description
CDDcd147022.02E-21290337No hitNo description
PROSITE patternPS000360292307IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    Send to blast
MGKGDGCSSE SFCISLRPSL TLSARVSASQ EDDNLNFYMT GKHIFVKGMA HDDAVATQKT  60
GKAASPPKDQ PAPYPYPDWS TMQAYYGPGV LPPTYFAPEI APGHAPPYMW GPQPIMPPPF  120
GTPYTPMYPH NGAYPHPLVP MISNPLSVEP AKSANSKDKS FSKTLNEING AAASAGSGSS  180
KRTMSSSEDY SAEGSSVNEQ KVSKTSRKRT SDDGPDAKME GVIASNHTLG HTSILPNHCF  240
PAPVIKPNAT NVANLREMGA AISPSPAAII SAHTGTATDL SIKDERELKH EKRKVSNRES  300
ARRSRMRKQA ETEELATQVE SLTQENVSLK SEISRLTNSS EKLRLENSAL MVKLKDPAAP  360
KPAESAPDKA ATPGVAPRDA ENFLSMIDGS NTAGAAQRTE HGEPKLRQLF DSQPATNVTA  420
VS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1301308RRSRMRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025807251.10.0common plant regulatory factor 1-like isoform X1
TrEMBLA0A0A9PLG00.0A0A0A9PLG0_ARUDO; GBF1
STRINGPavir.J01411.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01120.11e-26G-box binding factor 2