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Plant Transcription
Factor Database
v4.0
Previous version: v1.0,
v2.0,
v3.0
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Home BLAST Prediction RegMap ATRM Download Help About Links |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00008.1.g04660.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 458aa MW: 47495.4 Da PI: 7.1813 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 37.5 | 5.9e-12 | 32 | 83 | 1 | 53 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 ++y GVr ++ +++ A Irdps ++ kr +lg+++taeeAa a++aa + l Zjn_sc00008.1.g04660.1.am.mk 32 KKYIGVR-SRYGNKFGADIRDPSRGNAAKRLWLGTYDTAEEAACAHDAAVRTL 83 59****9.7789*********9764346********************98765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 7.66E-17 | 32 | 94 | No hit | No description |
SMART | SM00380 | 1.5E-14 | 33 | 98 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.4E-4 | 33 | 79 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.22E-12 | 33 | 93 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 15.382 | 33 | 92 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 4.3E-19 | 33 | 93 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 8.4E-5 | 34 | 45 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 8.4E-5 | 59 | 75 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 458 aa Download sequence Send to blast |
MEGGLTGYAK AAASKIKADR EAQGREPSSP GKKYIGVRSR YGNKFGADIR DPSRGNAAKR 60 LWLGTYDTAE EAACAHDAAV RTLSPNTKTN FPDLGEKEER DAVVHAHLAK TRRKLARVAD 120 GKMEAAEAAL AGARDIVSTL PAPPPSPAPA GDVVDLTDSP TGSPGEDDAV AALDMLQGQG 180 QAPEPVASSV SPAPPPPSAP HFVPSPVSEA FNSNDNLTQA ASGGASVAQN TPVLALPALV 240 NSFFPSPHAM ALPPPPGFPF APIFDPPPLA SHFPPRWIAR PPGFHLAPAP TAPATEAVVT 300 STPSPSTMAP VGGASAPNFA SFWGPVAAPP AFNPPHTTAP PPGFHPAPAS ATTALPITPE 360 TWEFLYQYHA ALSPVQAQHH LKILRELLPL SSFGPAIMNT DASSSAASAI SESQPEVEAF 420 RKLYRLLEKQ AAGAPVDAPV YDPGKQDGRR KKKRSGGA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 448 | 453 | RRKKKR |
2 | 448 | 454 | RRKKKRS |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP19719 | 5 | 8 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16770.1 | 2e-06 | ethylene-responsive element binding protein |