PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

Plant Transcription Factor Database

v4.0

Previous version: v1.0, v2.0, v3.0

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00008.1.g04660.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

ERF

Protein Properties

Length: 458aa MW: 47495.4 Da PI: 7.1813

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00008.1.g04660.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	37.5	5.9e-12	32	83	1	53
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 ++y GVr ++ +++ A Irdps ++ kr +lg+++taeeAa a++aa + l Zjn_sc00008.1.g04660.1.am.mk 32 KKYIGVR-SRYGNKFGADIRDPSRGNAAKRLWLGTYDTAEEAACAHDAAVRTL 83 59**9.7789*****9764346******************98765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00018	7.66E-17	32	94	No hit	No description
SMART	SM00380	1.5E-14	33	98	IPR001471	AP2/ERF domain
Pfam	PF00847	1.4E-4	33	79	IPR001471	AP2/ERF domain
SuperFamily	SSF54171	2.22E-12	33	93	IPR016177	DNA-binding domain
PROSITE profile	PS51032	15.382	33	92	IPR001471	AP2/ERF domain
Gene3D	G3DSA:3.30.730.10	4.3E-19	33	93	IPR001471	AP2/ERF domain
PRINTS	PR00367	8.4E-5	34	45	IPR001471	AP2/ERF domain
PRINTS	PR00367	8.4E-5	59	75	IPR001471	AP2/ERF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence Send to blast
MEGGLTGYAK AAASKIKADR EAQGREPSSP GKKYIGVRSR YGNKFGADIR DPSRGNAAKR 60 LWLGTYDTAE EAACAHDAAV RTLSPNTKTN FPDLGEKEER DAVVHAHLAK TRRKLARVAD 120 GKMEAAEAAL AGARDIVSTL PAPPPSPAPA GDVVDLTDSP TGSPGEDDAV AALDMLQGQG 180 QAPEPVASSV SPAPPPPSAP HFVPSPVSEA FNSNDNLTQA ASGGASVAQN TPVLALPALV 240 NSFFPSPHAM ALPPPPGFPF APIFDPPPLA SHFPPRWIAR PPGFHLAPAP TAPATEAVVT 300 STPSPSTMAP VGGASAPNFA SFWGPVAAPP AFNPPHTTAP PPGFHPAPAS ATTALPITPE 360 TWEFLYQYHA ALSPVQAQHH LKILRELLPL SSFGPAIMNT DASSSAASAI SESQPEVEAF 420 RKLYRLLEKQ AAGAPVDAPV YDPGKQDGRR KKKRSGGA

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence Send to blast

MEGGLTGYAK AAASKIKADR EAQGREPSSP GKKYIGVRSR YGNKFGADIR DPSRGNAAKR  60
LWLGTYDTAE EAACAHDAAV RTLSPNTKTN FPDLGEKEER DAVVHAHLAK TRRKLARVAD  120
GKMEAAEAAL AGARDIVSTL PAPPPSPAPA GDVVDLTDSP TGSPGEDDAV AALDMLQGQG  180
QAPEPVASSV SPAPPPPSAP HFVPSPVSEA FNSNDNLTQA ASGGASVAQN TPVLALPALV  240
NSFFPSPHAM ALPPPPGFPF APIFDPPPLA SHFPPRWIAR PPGFHLAPAP TAPATEAVVT  300
STPSPSTMAP VGGASAPNFA SFWGPVAAPP AFNPPHTTAP PPGFHPAPAS ATTALPITPE  360
TWEFLYQYHA ALSPVQAQHH LKILRELLPL SSFGPAIMNT DASSSAASAI SESQPEVEAF  420
RKLYRLLEKQ AAGAPVDAPV YDPGKQDGRR KKKRSGGA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	448	453	RRKKKR
2	448	454	RRKKKRS

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP19719	5	8

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16770.1	2e-06	ethylene-responsive element binding protein