PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun011441
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family MYB_related
Protein Properties Length: 147aa    MW: 16161.2 Da    PI: 10.1264
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45952964PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.94.7e-0890135447
                      S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 
                      W+  Ed  l++a k ++++   +W+++a+ ++ gR+   c  r+  +
        Vun011441  90 WSSGEDIALLNALKVFPKDvsmRWEKVAAAVP-GRSKAACMRRFTEL 135
                      ********************************.*********99765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM0071732148IPR001005SANT/Myb domain
PROSITE profilePS512939.0985140IPR017884SANT domain
SuperFamilySSF466891.56E-1186137IPR009057Homeodomain-like
SMARTSM007178.1E-586138IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.5E-688136IPR009057Homeodomain-like
PfamPF002494.3E-790135IPR001005SANT/Myb domain
CDDcd001678.00E-790136No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
XEDVEVLKKQ LVKNPVGKPG RWEAIAAAFG GRHGVESVIK KAKELGEKKV DDSDSYALFL  60
KNRKTLDKRV VEENGGEDSV TVDKAVDNGW SSGEDIALLN ALKVFPKDVS MRWEKVAAAV  120
PGRSKAACMR RFTELKKGFR NAKAANE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014513065.15e-95PREDICTED: dnaJ homolog subfamily C member 2
TrEMBLA0A0L9TJL13e-94A0A0L9TJL1_PHAAN; Uncharacterized protein
TrEMBLA0A0S3QY803e-94A0A0S3QY80_PHAAN; Uncharacterized protein
STRINGGLYMA05G32270.12e-80(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45420.13e-64MYB_related family protein