PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun008403
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family NAC
Protein Properties Length: 270aa    MW: 30170.1 Da    PI: 9.437
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-167a-Vigna_unguiculata-5079PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM62.61.2e-1925577128
        NAM  77 atksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                atk+gyWkatgkd++v+++   ++++g +ktLvfy grap g +tdWvmheyrl
  Vun008403   2 ATKAGYWKATGKDRKVVCQsnPSNVTGYRKTLVFYAGRAPLGDRTDWVMHEYRL 55 
                699**************98666778***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100527.897178IPR003441NAC domain
PfamPF023651.3E-9255IPR003441NAC domain
SuperFamilySSF1019411.57E-23278IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
XATKAGYWKA TGKDRKVVCQ SNPSNVTGYR KTLVFYAGRA PLGDRTDWVM HEYRLCDDLG  60
QPTPSFQGGF ALCRVIKKNE KASATKGENK GKRAGSSSIN GSDTSVRFSG EPFSNSGDSS  120
SHASQLNNES RYSSPITSPY NVAPMGEINQ ASLETNPSNF WISRDMILDS SKELFLIYSM  180
PVAEYFPRYD LPKYGDTMAI SGTFRNSIWF LPTQMSMEKL NLLILSVKLA ACHLTQENGI  240
PWTSMEMVEM SLMKIMIKLT QSRIRDPFKI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-1258395170NO APICAL MERISTEM PROTEIN
1ut4_B1e-1258395170NO APICAL MERISTEM PROTEIN
1ut7_A1e-1258395170NO APICAL MERISTEM PROTEIN
1ut7_B1e-1258395170NO APICAL MERISTEM PROTEIN
3swm_A1e-1258398173NAC domain-containing protein 19
3swm_B1e-1258398173NAC domain-containing protein 19
3swm_C1e-1258398173NAC domain-containing protein 19
3swm_D1e-1258398173NAC domain-containing protein 19
3swp_A1e-1258398173NAC domain-containing protein 19
3swp_B1e-1258398173NAC domain-containing protein 19
3swp_C1e-1258398173NAC domain-containing protein 19
3swp_D1e-1258398173NAC domain-containing protein 19
4dul_A1e-1258395170NAC domain-containing protein 19
4dul_B1e-1258395170NAC domain-containing protein 19
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027920378.11e-127NAC domain-containing protein 71
TrEMBLA0A4D6L0U81e-126A0A4D6L0U8_VIGUN; Uncharacterized protein
STRINGXP_007155764.11e-118(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17980.15e-41NAC domain containing protein 71