PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun004826
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family NAC
Protein Properties Length: 209aa    MW: 23928 Da    PI: 9.8682
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-167a-Vigna_unguiculata-4635362PU_refplantGDBView CDS
gnl|UG|Vun#S45823830PU_unrefUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM100.72.1e-31161321128
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 
                lp GfrF Ptd+el+ +yLk+k+ +++l++ +vi+e+di++++P  Lp  +   +++ yfFs+  k       ++r++ sg Wk  gk+ke+ +  ++e+
  Vun004826  16 LPIGFRFCPTDQELLLHYLKNKAFAQQLPA-SVIPETDIFQTHPCLLPGDL---REKRYFFSNCGK------VNKRSAGSGCWKYVGKEKEIRVCeSNEV 105
                699***************************.99***************543...4578****9866......467999**************88657888 PP

        NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                +g+kktL+f kg++++  +t+Wvmhe rl
  Vun004826 106 IGMKKTLIFCKGSHET--RTRWVMHELRL 132
                **********888877..9*******987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.23E-3810153IPR003441NAC domain
PROSITE profilePS5100536.03516153IPR003441NAC domain
PfamPF023652.3E-2017132IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
MEGFEEGFVV KGGIKLPIGF RFCPTDQELL LHYLKNKAFA QQLPASVIPE TDIFQTHPCL  60
LPGDLREKRY FFSNCGKVNK RSAGSGCWKY VGKEKEIRVC ESNEVIGMKK TLIFCKGSHE  120
TRTRWVMHEL RLVTSYAYQM AVADFAVYVI FQKRKKTPKA SQQRPFCSSK LQRVHDVKPS  180
IMDFDHDNIL LPPPSSPSLL QTVVKLLRT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-201413213140Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027923726.11e-151NAC domain-containing protein 83-like
TrEMBLA0A0L9VMI61e-120A0A0L9VMI6_PHAAN; Uncharacterized protein
TrEMBLA0A0S3T9I01e-120A0A0S3T9I0_PHAAN; Uncharacterized protein
STRINGXP_007151796.11e-103(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.12e-37NAC domain containing protein 83