PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun004583
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family NAC
Protein Properties Length: 218aa    MW: 24626.2 Da    PI: 9.2606
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-167a-Vigna_unguiculata-19956PU_refplantGDBView CDS
gnl|UG|Vun#S45831660PU_unrefUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM81.22.2e-25281531128
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel. 99 
                lp+G+rF+Ptd  l  +yL+k+++g++l+    i + d++++ePw+Lp   k  + + +fF + +  ++    ++r + +g W+   kd+ev   +++l 
  Vun004583  28 LPVGYRFDPTDPVLAGYYLTKRLRGHPLPN-GLILDYDVHQTEPWELPGGGKFMNWQKFFFYNVKGLNP----EKRDAGKGQWEMVEKDEEVEFYDEQLa 122
                799************************999.89***************543333335588877766654....6888999************98766556 PP

        NAM 100 ..vglkktLvfykgrapkgektdWvmheyrl 128
                  +  k +Lvf+k + ++  kt+Wvmhe+rl
  Vun004583 123 plTAKKSVLVFWKSKGNSLAKTKWVMHEFRL 153
                76888999*********************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.84E-3024172IPR003441NAC domain
PROSITE profilePS5100532.45228173IPR003441NAC domain
PfamPF023655.0E-1529153IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    Send to blast
GSLQSQKVFG VASLMEVFNP VEGKTYKLPV GYRFDPTDPV LAGYYLTKRL RGHPLPNGLI  60
LDYDVHQTEP WELPGGGKFM NWQKFFFYNV KGLNPEKRDA GKGQWEMVEK DEEVEFYDEQ  120
LAPLTAKKSV LVFWKSKGNS LAKTKWVMHE FRLALKSNPS KMSAMGVCRI FERKTSKRAK  180
RARVSTEGVS NAEEAMEVID FTVECGTETS PPPPPGTP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A6e-162817617168NO APICAL MERISTEM PROTEIN
1ut4_B6e-162817617168NO APICAL MERISTEM PROTEIN
1ut7_A6e-162817617168NO APICAL MERISTEM PROTEIN
1ut7_B6e-162817617168NO APICAL MERISTEM PROTEIN
3swm_A6e-162817620171NAC domain-containing protein 19
3swm_B6e-162817620171NAC domain-containing protein 19
3swm_C6e-162817620171NAC domain-containing protein 19
3swm_D6e-162817620171NAC domain-containing protein 19
3swp_A6e-162817620171NAC domain-containing protein 19
3swp_B6e-162817620171NAC domain-containing protein 19
3swp_C6e-162817620171NAC domain-containing protein 19
3swp_D6e-162817620171NAC domain-containing protein 19
4dul_A6e-162817617168NAC domain-containing protein 19
4dul_B6e-162817617168NAC domain-containing protein 19
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027920185.11e-151NAC domain-containing protein 83-like
TrEMBLA0A4D6M7Y21e-150A0A4D6M7Y2_VIGUN; Uncharacterized protein
STRINGXP_007161703.12e-95(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.21e-22NAC domain containing protein 38