PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang11g08490.1
Common NameLR48_Vigan01g269900
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 177aa    MW: 20155.6 Da    PI: 9.557
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang11g08490.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.86.4e-1568127463
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     +++ +r+ +NRe+ArrsR RKk++ie L+  v+ L++ N++L +++  l +  ++  +++
  Vang11g08490.1  68 DRKKKRMFSNRESARRSRMRKKQQIEVLQYHVDHLQTLNHQLSQKIIYLLECNQQIHQQN 127
                     7899****************************************9988888888877776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.5E-1365129IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.25467130IPR004827Basic-leucine zipper domain
PfamPF001706.3E-1368127IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.75E-1169120No hitNo description
Gene3DG3DSA:1.20.5.1709.2E-1369127No hitNo description
CDDcd147022.99E-1370118No hitNo description
PROSITE patternPS0003607287IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
METGEGHNLT HLDQPHSLHH FPFFCSQLHL PSNSHDPIKI PLHKPSPNTS SNSNNNNNSD  60
EAKALLDDRK KKRMFSNRES ARRSRMRKKQ QIEVLQYHVD HLQTLNHQLS QKIIYLLECN  120
QQIHQQNSQL KEKVSSLQVV LYDLLVPAAG AEQPHHIPNG FLAEPSSTRP ISSSRT*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang11g08490.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150340.0AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017432446.11e-126PREDICTED: basic leucine zipper 43-like
TrEMBLA0A0L9TRC81e-125A0A0L9TRC8_PHAAN; Uncharacterized protein
TrEMBLA0A0S3R7E81e-125A0A0S3R7E8_PHAAN; Uncharacterized protein
STRINGXP_007155196.17e-95(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF130442430
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60830.12e-29basic leucine-zipper 70
Publications ? help Back to Top
  1. Yang K, et al.
    Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication.
    Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8
    [PMID:26460024]