PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang06g08980.3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family G2-like
Protein Properties Length: 266aa    MW: 29015.1 Da    PI: 6.5071
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang06g08980.3genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like35.32.5e-111233355
         G2-like 33 lelmkvkgLtlehvkSHLQkYRl 55
                    +++m+vkgLtl+h+kSHLQkYRl
  Vang06g08980.3  1 MRTMNVKGLTLYHLKSHLQKYRL 23
                    689*******************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.7E-10124IPR009057Homeodomain-like
PfamPF143793.6E-1392137IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MRTMNVKGLT LYHLKSHLQK YRLGKQSGKD SDEGCKDGSN NVYIISFCIG LNLVSFIEKP  60
MQGMSGSYLQ ESPGTDNSSP KLPTSDANEG HEVKEALRAQ MEVQSKLHLL VEAEKHLQIR  120
QDAERRYMGM LERACKMLAD QFIGDIIMDT DGQKFQGLES KTPRSSLVDH VGFFPPVCSE  180
VGGMHVSEVP PILQPQGADC STESCLTSLE SLGGLTLEGS PGGSKKRMLS LDSMVAPLIW  240
SEANTRTQGI HLAQVNPPGI TRYGM*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang06g08980.3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150410.0AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014511135.11e-171protein PHR1-LIKE 2 isoform X3
RefseqXP_017437288.11e-171PREDICTED: protein PHR1-LIKE 2-like isoform X1
TrEMBLA0A0S3SP851e-170A0A0S3SP85_PHAAN; Uncharacterized protein
STRINGXP_007144235.11e-163(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.13e-32G2-like family protein