PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang05g01780.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family G2-like
Protein Properties Length: 411aa    MW: 45604.4 Da    PI: 8.5428
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang05g01780.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like322.8e-10143167226
         G2-like   2 prlrWtpeLHerFveaveqLGGsek 26 
                     pr+rWt++LH++Fv++v+ LGG+e 
  Vang05g01780.1 143 PRMRWTTTLHAHFVHVVQLLGGHES 167
                     9*********************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.2E-7140168IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    Send to blast
MCTIPHTVMP TFAPLPEPDL SLNISPPVTS DPDAKQLETT CSGFTLTTKT LYTDLCSTSD  60
SGSSGSDLSH ENGFRHTVYN LAHREQPTLS LGSGRENLNP YPIQGAVSRN FNYLHNYQPQ  120
TNTVDFKRNP RGIQGVKRSS RAPRMRWTTT LHAHFVHVVQ LLGGHESKSS TQLSKHSLHA  180
MIQVLNSGCN RGHCFLRSLT LGNSEVCVRV NEREGSNSSS REESLAGGVT VSISLHSPWF  240
LFRVGKLEQR LRTKRYLDAN LSVVDFSSHF ISCGMFMQMY RTVKSSDKSS AGYGQTSIGL  300
SRKPGIVDLY GACERPNLPQ PLLKSHRTPW QSSMETNSIN YIQSPIINSM CSDMRENQTM  360
VGGQHYGGLS NCMEEKLESC TLSRSDMTLD LEFTLGRPTT CKEITQKQQN *
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang05g01780.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150350.0AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017435884.11e-107PREDICTED: probable transcription factor KAN4
TrEMBLA0A0L9V9I41e-106A0A0L9V9I4_PHAAN; Uncharacterized protein
TrEMBLA0A0S3RB201e-106A0A0S3RB20_PHAAN; Uncharacterized protein
STRINGXP_007136645.11e-76(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF44633358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42630.23e-18G2-like family protein