PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang04g09350.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family G2-like
Protein Properties Length: 206aa    MW: 23123 Da    PI: 9.8083
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang04g09350.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like37.55.1e-121338126
         G2-like  1 kprlrWtpeLHerFveaveqLGGsek 26
                    k+rlrWt+eLH+rFv av++LGG+++
  Vang04g09350.1 13 KERLRWTQELHDRFVVAVNRLGGPDR 38
                    68**********************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.5E-91139IPR009057Homeodomain-like
TIGRFAMsTIGR015571.7E-71338IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MGSSRSRASA TAKERLRWTQ ELHDRFVVAV NRLGGPDRKG NTKRYIERNE DYGYFRAKHL  60
SCQKPLAVEH GFVQKYRISK LIPESSTRGK VEKRSISDIL PNFSSISLGQ SSEMKTRTGK  120
ACKAFDSSTT APLPSLSEES ESLKSQSEKE HESVKKQRIS EEGVFPLSFE HASSTPPEFY  180
NQTWNLPWSQ LAAACLSTLD PSFIF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang04g09350.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150371e-166AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017418144.11e-109PREDICTED: myb family transcription factor PHL7-like
TrEMBLA0A0L9U3Z61e-108A0A0L9U3Z6_PHAAN; Uncharacterized protein
STRINGXP_007140328.12e-84(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106592535
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.27e-14G2-like family protein