PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang01g02000.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family G2-like
Protein Properties Length: 140aa    MW: 16391.7 Da    PI: 9.1235
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang01g02000.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like35.32.6e-111740225
         G2-like  2 prlrWtpeLHerFveaveqLGGse 25
                    prlrWtp+LH++Fv+a+e+LGG++
  Vang01g02000.1 17 PRLRWTPQLHHHFVQAIESLGGKH 40
                    8*********************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.7E-91443IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
MKNRERSVRQ YNKSELPRLR WTPQLHHHFV QAIESLGGKH SHHISVTSFP FTLNGSINEL  60
DQIMYRNMKG YAKKCADELM EGNVKDFKVC SICPTQRYFQ NIFAYEIMKK VELQLLDNKK  120
GLSQSNEETD YDLNQVRTH*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang01g02000.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150362e-64AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007141445.19e-49hypothetical protein PHAVU_008G196200g
TrEMBLA0A0S3RJM84e-64A0A0S3RJM8_PHAAN; Uncharacterized protein
STRINGXP_007141445.14e-48(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF91862839
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40260.13e-10G2-like family protein