PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0065s00150.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family G2-like
Protein Properties Length: 318aa    MW: 35301.1 Da    PI: 5.4771
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0065s00150.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like35.52.2e-112044125
           G2-like  1 kprlrWtpeLHerFveaveqLGGse 25
                      kprl+WtpeLH+rF+ea +qLGG++
  Vang0065s00150.1 20 KPRLKWTPELHQRFIEATNQLGGAD 44
                      79*********************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.7E-101848IPR009057Homeodomain-like
PfamPF143794.9E-21124170IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MDLQNMQNQS MHFVLSTDAK PRLKWTPELH QRFIEATNQL GGADSESNSK ESYEGDGDSR  60
TYFVPPEEPF TGIHSPFKYR LGKSQQLDTS SDSKQEDYIE TKSSDGHCSR EISLGAQNQI  120
TENMQIAQAL QMQMEVQRKL YEQIEVQKHL KLRIEAQGKY LQSVLKKAQE ALAGYNSAPV  180
GIELTKAELS QLVTIINNAC PSSPISELTE TRGLSLSCGD RKRDRGTMCS LESSLTSSES  240
SGRKEEKQSM EEIEEFKSSN NASVELPLMG FHTENKASNT GSSNEASGRK RSAATKSNDE  300
NNKFLLLQVG NGTHWFG*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0065s00150.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150430.0AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014628881.10.0myb family transcription factor PHL8 isoform X1
TrEMBLA0A445LMA11e-180A0A445LMA1_GLYSO; Myb family transcription factor PHL8
STRINGXP_007157612.11e-171(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF52183253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69580.13e-53G2-like family protein