PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0041ss00450.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 139aa    MW: 15479.3 Da    PI: 4.196
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0041ss00450.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2292.6e-0923571855
                AP2 18 eIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       eIr p   ++++r++lg++ t+e Aa+a++aa ++l+g
  Vang0041ss00450.1 23 EIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCLKG 57
                       56666...236************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103213.907665IPR001471AP2/ERF domain
SMARTSM003808.4E-131771IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.2E-182366IPR001471AP2/ERF domain
SuperFamilySSF541715.62E-122367IPR016177DNA-binding domain
PfamPF008476.0E-52857IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    Send to blast
MQALAIASKV SKHGYSTVEE REEIRAPNQK TRIWLGSYST PEAAARAYDA ALLCLKGSSA  60
NFNFPLSSSQ YIPGDAVIYG QANESMAMNE MEPWYTLDDL QSPKYVDQML SGAFFDVDSS  120
HLLDDLYEES DIRLWSFC*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0041ss00450.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150356e-98AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017421238.13e-37PREDICTED: ethylene-responsive transcription factor ERF014
TrEMBLI3S9086e-40I3S908_LOTJA; Uncharacterized protein
STRINGXP_004500566.12e-35(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47983156
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G44830.16e-17ERF family protein