PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678473760
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family G2-like
Protein Properties Length: 132aa    MW: 15102.4 Da    PI: 9.8612
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678473760genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like28.72.9e-0992113122
    G2-like   1 kprlrWtpeLHerFveaveqLG 22 
                kpr++W+ +LH++Fv+av+q+G
  678473760  92 KPRVVWSVDLHQKFVQAVNQIG 113
                79*******************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23002.7E-11161No hitNo description
PROSITE profilePS5011014.541139IPR001789Signal transduction response regulator, receiver domain
SuperFamilySSF521724.13E-7246IPR011006CheY-like superfamily
Gene3DG3DSA:1.10.10.601.0E-891118IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    Send to blast
MSVDGETSRV MKGVQHGACD YLLKPIRMKE LRNIWQHVFR KRIHEGGIEE TQYMKSSVER  60
SEDGNCVAGK RKKDEERACS DASSSSTNMI KKPRVVWSVD LHQKFVQAVN QIGLESKNLK  120
LRCSKQKSFP CC
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678473760
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011071178.19e-47two-component response regulator ORR26
SwissprotQ5N6V81e-39ORR26_ORYSJ; Two-component response regulator ORR26
TrEMBLA0A2G9I9H32e-44A0A2G9I9H3_9LAMI; Uncharacterized protein
STRINGVIT_01s0010g02230.t016e-42(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA67882433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.11e-33response regulator 11
Publications ? help Back to Top
  1. Du L, et al.
    The two-component signal system in rice (Oryza sativa L.): a genome-wide study of cytokinin signal perception and transduction.
    Genomics, 2007. 89(6): p. 697-707
    [PMID:17408920]