PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678468073
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family NAC
Protein Properties Length: 462aa    MW: 52234 Da    PI: 4.9572
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678468073genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM104.41.5e-32581971128
        NAM   1 lppGfrFhPtdeelvveyLkkk.vegkk....leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....sgyWkatgk 88 
                lp+G++F+P+d+e++++ L+k  ve+ k    ++++   ++e  +i++++P++Lp  vk++ +  +fF+++ k+y+tg+rk+r+++     + +W++tg+
  678468073  58 LPRGVKFDPSDQEIIWHLLAKAgVEHIKphpfIDEFIPtVEEEdGICYTHPQNLP-GVKQDGTVSHFFHRAVKAYNTGTRKRRKIQgdeyaDVRWHKTGR 156
                799************887776633333355453333333555546**********.677888999******************85555555889****** PP

        NAM  89 dkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                +k+vl  +g ++g+kk++v+y  + +  k+ekt+Wvmh+y+l
  678468073 157 TKAVLL-DGVQKGCKKIMVLYvcSVKGGKSEKTNWVMHQYHL 197
                ******.99************8767888888*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.4E-3843216IPR003441NAC domain
PROSITE profilePS5100530.20158216IPR003441NAC domain
PfamPF023657.6E-1459197IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000077Biological ProcessDNA damage checkpoint
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010332Biological Processresponse to gamma radiation
GO:0040020Biological Processregulation of meiotic nuclear division
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    Send to blast
MAGPSWLVDP NRIATKIRSA SGALDPGKIT WKSNPTKSCP NCQHVIDNSD VIQVWPGLPR  60
GVKFDPSDQE IIWHLLAKAG VEHIKPHPFI DEFIPTVEEE DGICYTHPQN LPGVKQDGTV  120
SHFFHRAVKA YNTGTRKRRK IQGDEYADVR WHKTGRTKAV LLDGVQKGCK KIMVLYVCSV  180
KGGKSEKTNW VMHQYHLGTG EDEQDGEYVI SKIFYQQQQA KLNERNEGDR DHPETTEMPV  240
AKVDPVTPNS VIPEPPRAEN RTLDRDAVHD SALFTLVAHQ GEQLMMAEVD TNNCEIQGWE  300
DRTPDHDPDH HSTVLPLVQN QDEHLMMTEL DAHDSQNHGE LKNSDDPSDN KWWENESQFL  360
LSSQQLVEGL SLCDELLQSQ SPNRDDNVNT QDKSNKILLS HYAHLGPEDL KRDLEECQKL  420
NIDPANIELD TPPDFRLSQL EFESQESYVA FGGSLHTGSK VD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011077291.10.0PREDICTED: NAC domain-containing protein 8
SwissprotQ6NQK21e-174NAC8_ARATH; NAC domain-containing protein 8
TrEMBLA0A059BGG60.0A0A059BGG6_EUCGR; Uncharacterized protein
TrEMBLA0A068TYZ20.0A0A068TYZ2_COFCA; Uncharacterized protein
STRINGPGSC0003DMT4000021220.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA81622430
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.11e-175NAC family protein