PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678466052
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 252aa    MW: 27736.9 Da    PI: 5.9077
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678466052genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.31e-09841102753
        AP2  27 krkrfslgkfgtaeeAakaaiaarkkl 53 
                 ++r++lg+f taeeAa+a+++a+  +
  678466052  84 LKRRVWLGTFETAEEAARAYDEAAVLM 110
                569********************9765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103215.42259120IPR001471AP2/ERF domain
SMARTSM003801.7E-1859126IPR001471AP2/ERF domain
CDDcd000186.20E-2060121No hitNo description
Gene3DG3DSA:3.30.730.102.7E-1962120IPR001471AP2/ERF domain
SuperFamilySSF541712.81E-1275121IPR016177DNA-binding domain
PfamPF008479.6E-684107IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
SEKGWYNDLV APWDYKTMGW EEAVRHLLQS GNRILGRSPS LEENGPEQEV QRGPTTPLGF  60
LGVRDSPPIA VNVQYSSLLR DRMLKRRVWL GTFETAEEAA RAYDEAAVLM SGRNAKTNFP  120
VPENVGNACS GYVSSSSSRP SSLSSILGAK LRKCCRSPSL TCLRLDTENS HIGVWQKRAG  180
STSDSNWVMT VELGEKQSTE NTSLSTAAAV PSNPSPNNSD SSSTVPPMQT REGIKEEERI  240
ALQMIEEFLN RN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18086DRMLKRR
Functional Description ? help Back to Top
Source Description
UniProtPromotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis (PubMed:15070782, PubMed:15319479). Confers drought resistance (PubMed:15319479). Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:15070782, ECO:0000269|PubMed:15319479}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678466052
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006475843.18e-63ethylene-responsive transcription factor WIN1
RefseqXP_022845341.16e-63ethylene-responsive transcription factor WIN1-like
RefseqXP_022845391.16e-63ethylene-responsive transcription factor WIN1-like
RefseqXP_022845453.16e-63ethylene-responsive transcription factor WIN1-like
SwissprotQ9XI333e-52WIN1_ARATH; Ethylene-responsive transcription factor WIN1
TrEMBLS8CLD51e-65S8CLD5_9LAMI; Uncharacterized protein
STRINGXP_006475843.13e-62(Citrus sinensis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13522476
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.12e-39ERF family protein
Publications ? help Back to Top
  1. Taketa S, et al.
    Barley grain with adhering hulls is controlled by an ERF family transcription factor gene regulating a lipid biosynthesis pathway.
    Proc. Natl. Acad. Sci. U.S.A., 2008. 105(10): p. 4062-7
    [PMID:18316719]
  2. Al-Abdallat AM,Al-Debei HS,Ayad JY,Hasan S
    Over-expression of SlSHN1 gene improves drought tolerance by increasing cuticular wax accumulation in tomato.
    Int J Mol Sci, 2014. 15(11): p. 19499-515
    [PMID:25350113]
  3. Djemal R,Khoudi H
    Isolation and molecular characterization of a novel WIN1/SHN1 ethylene-responsive transcription factor TdSHN1 from durum wheat (Triticum turgidum. L. subsp. durum).
    Protoplasma, 2015. 252(6): p. 1461-73
    [PMID:25687296]
  4. Sadler C, et al.
    Wax and cutin mutants of Arabidopsis: Quantitative characterization of the cuticular transport barrier in relation to chemical composition.
    Biochim. Biophys. Acta, 2016. 1861(9 Pt B): p. 1336-1344
    [PMID:26965486]
  5. Sajeevan RS, et al.
    Expression of Arabidopsis SHN1 in Indian Mulberry (Morus indica L.) Increases Leaf Surface Wax Content and Reduces Post-harvest Water Loss.
    Front Plant Sci, 2017. 8: p. 418
    [PMID:28421085]