PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678465066
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 213aa    MW: 23214.7 Da    PI: 8.4373
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678465066genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.44.9e-202069255
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               +y+GVr ++ +gr++AeIrdp +   ++r++lg+f+tae Aa+a++aa+++++g
  678465066 20 HYRGVRKRP-WGRYAAEIRDPDK---KRRVWLGTFDTAEAAARAYDAAAREFRG 69
               6********.**********843...6*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008477.6E-142069IPR001471AP2/ERF domain
PROSITE profilePS5103224.1842077IPR001471AP2/ERF domain
SuperFamilySSF541715.43E-222078IPR016177DNA-binding domain
CDDcd000182.06E-192076No hitNo description
Gene3DG3DSA:3.30.730.101.7E-312077IPR001471AP2/ERF domain
SMARTSM003809.4E-382083IPR001471AP2/ERF domain
PRINTSPR003676.5E-112132IPR001471AP2/ERF domain
PRINTSPR003676.5E-114359IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    Send to blast
MSMKAKEMEQ SSGGGADEVH YRGVRKRPWG RYAAEIRDPD KKRRVWLGTF DTAEAAARAY  60
DAAAREFRGQ KAKTNFSIPS ETVARSPSQS STVESSCADV NSDTRPQAGL SFTRRPTDSS  120
VVTIAAHHAY PLFASQQAPV MFLQANTNTP QIFLFQALPQ PPIYKTAAAP IVVPGIPRGA  180
PLGTDSDTSS VVDENLYDGP DPRRVLDLDL NQX
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-21876171Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12443RKRPWGRYAAEIRDPDKKRR
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678465066
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Strongly and quickly induced by ethylene. {ECO:0000269|PubMed:10945353}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011100355.11e-46ethylene-responsive transcription factor 4-like
SwissprotQ9LW492e-43ERF4_NICSY; Ethylene-responsive transcription factor 4
TrEMBLA0A2G9HCE22e-53A0A2G9HCE2_9LAMI; Uncharacterized protein
STRINGXP_009772525.11e-41(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53170.16e-22ethylene response factor 8