PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678462202
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family AP2
Protein Properties Length: 432aa    MW: 46986.2 Da    PI: 6.7183
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678462202genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.11.6e-16144193155
        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+  ++g
  678462202 144 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIMFRG 193
                78*******************......55*********************988775 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.24E-15144202IPR016177DNA-binding domain
PfamPF008476.0E-9144193IPR001471AP2/ERF domain
CDDcd000185.24E-11145203No hitNo description
SMARTSM003801.3E-31145207IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.4E-17145202IPR001471AP2/ERF domain
PROSITE profilePS5103217.372145201IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    Send to blast
MLDLNVDAAG EVDFAFQGGK TPTATDSVGS TTTSAAVDEL DCNTSLFTLN FSILGKDAIH  60
IDDDVNNEEN VDDNVSEELQ LFPTAPSSAS ATAQYWLNLS AAPEFSSGGG VELGIYKTHL  120
PMSSNQVPQP QVKKSRRGPR SRSSQYRGVT FYRRTGRWES HIWDCGKQVY LGGFDTAHAA  180
ARAYDRAAIM FRGVDADINF NTSDYEEDMK QMKNFTKEEL VHLLRRQSTG FPRGNSKYRG  240
SASLPKCNQW QLLEKKAYEK SIAQRNENEA IPVANLEPSI YTREVNFGRR DAGSGSSLDL  300
NLGISVSSDS SQGNGFAAVK TLQFPSSTMP ANQNLQGEPK YHAASWGAIF PGFSTNTKDK  360
SAAVKTSVEA GYSAGTQMWP WKMQSQGVVP LHAVPISPSA ASSGFAHAVS PCLSSLLTCK  420
QRPQFPSFQS LP
Cis-element ? help Back to Top
SourceLink
PlantRegMap678462202
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011077024.11e-112AP2-like ethylene-responsive transcription factor TOE3 isoform X2
TrEMBLA0A2Z7AQW51e-109A0A2Z7AQW5_9LAMI; Uncharacterized protein
STRINGMigut.F02018.1.p1e-101(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59124116
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.14e-65related to AP2.7