PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678460544
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 186aa    MW: 19894.3 Da    PI: 9.2288
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678460544genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP268.99.1e-221262256
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
               +y+GVr ++ +gr++AeIrdp   gkr r++lg+f+taeeAa+a++aa+++++g+
  678460544 12 HYRGVRKRP-WGRYAAEIRDP---GKRSRVWLGTFDTAEEAARAYDAAALEFRGH 62
               6********.**********9...557**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.5E-391275IPR001471AP2/ERF domain
PfamPF008471.3E-151262IPR001471AP2/ERF domain
PROSITE profilePS5103224.7641269IPR001471AP2/ERF domain
CDDcd000185.69E-191269No hitNo description
SuperFamilySSF541712.75E-231270IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.105.3E-331269IPR001471AP2/ERF domain
PRINTSPR003671.0E-111324IPR001471AP2/ERF domain
PRINTSPR003671.0E-113551IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
MAAKSNGDNV VHYRGVRKRP WGRYAAEIRD PGKRSRVWLG TFDTAEEAAR AYDAAALEFR  60
GHKAKTNFPL PLEALRSPSM SSNAESSSAD VGTRLRGPNA DSAVTIGSFN GYSFLRPQPT  120
VAVLPNGQPV LLFQPSMGTS APATPQGGAL RCEAERSSLV DQKGCDGCEP KRVVGLDLNQ  180
PPPQEA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-221270564ATERF1
3gcc_A1e-221270564ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678460544
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Strongly and quickly induced by ethylene. {ECO:0000269|PubMed:10945353}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011100355.11e-53ethylene-responsive transcription factor 4-like
SwissprotQ9LW492e-46ERF4_NICSY; Ethylene-responsive transcription factor 4
TrEMBLA0A2G9HCE23e-64A0A2G9HCE2_9LAMI; Uncharacterized protein
STRINGMigut.M00159.1.p2e-46(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.12e-26erf domain protein 9