PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678441522
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 346aa    MW: 38029.1 Da    PI: 5.5692
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678441522genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.52.7e-09164209555
                HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                h ++Er+RR+ + ++f+ L  ++P       kK++K ++L  +++Y+k+Lq
  678441522 164 HIIAERKRRELLGQRFSALSAIVPGI-----KKMDKNSVLGSTINYLKHLQ 209
                899*********************97.....7******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.27E-16159226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.068159208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.54E-9164213No hitNo description
Gene3DG3DSA:4.10.280.104.9E-14164222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.9E-7164209IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.9E-13165214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MEMDSSALSE TVKQSPNCHT LPASRLRGNE QLFTGLEETC VFMDDLFDED ELADLQRSLE  60
AALAAPAPPE PTKKTKSSGS TRKKLCKGSS APIVISFGKL NGDQKNSEKR QTRGELTPEE  120
EAAVSEALRC SSSTAGRGDL PKAATAPPGK KNSRIRPPEQ TYDHIIAERK RRELLGQRFS  180
ALSAIVPGIK KMDKNSVLGS TINYLKHLQE QVQILEEKAE NQSRDWGVLV RKSLIDGFGK  240
NRGREDMNEE EEEQALPAVE ARIKEHEVVV RIQCEIQKGV LANLLREVED LHLAVVTANL  300
TALGGLALDI TINAEMEKEF NATGIEVATR LGAAIQRLAH RSPCEE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1167172ERKRRE
Cis-element ? help Back to Top
SourceLink
PlantRegMap678441522
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011073652.13e-72transcription factor bHLH18-like
TrEMBLA0A2G9I4F12e-67A0A2G9I4F1_9LAMI; Transcription factor HAND2/Transcription factor TAL1/TAL2/LYL1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA17602461
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-34bHLH family protein