PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678440121
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bZIP
Protein Properties Length: 436aa    MW: 48948.2 Da    PI: 8.327
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678440121genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1346.2e-11146190246
                XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                ++ k+ +r+++NReAAr+sR RKk ++++Le  +  Le+  ++Lk
  678440121 146 RSQKALKRLAQNREAARKSRMRKKVYVQQLESSCMRLEELEQELK 190
                78899********************************99998887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.2E-6145207IPR004827Basic-leucine zipper domain
PfamPF001705.8E-8146190IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.163147191IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.5E-8149191No hitNo description
Gene3DG3DSA:1.20.5.1709.8E-10150191No hitNo description
PROSITE patternPS000360152167IPR004827Basic-leucine zipper domain
PfamPF141442.8E-27228300IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    Send to blast
MQRVSASPPR GMSLNKNSDF DSQTPSPFHQ RCRSEETRNR TCFEDIGGSA YQGTMCSGAK  60
AADVSFDSTE YQSSAPRFNN GLVSAQMLSS GFDTSGRIRS FGKRVDSKVV ADTGHQTDAD  120
DKSQGVACHG SIYVPDSFNQ TKGADRSQKA LKRLAQNREA ARKSRMRKKV YVQQLESSCM  180
RLEELEQELK TARPQSFMLS RNVDNSVTGN VFDLSYATWS DEHSRLIGNL RRALKSQSTE  240
SQLRLALECV MSHYDELFHL KSIGAKYDVF HMLSGMWKTP AERCFMWLGG FRCSEILKII  300
GKEIEPLTEQ QLVGMCDLQQ SSHQAEDALS QGMEALQQSI METLSSTLDS HSGLSTSGSV  360
VSYMEQMATA MSKLAILESF LHQADLLRQQ TLHRLQRILT THQAARALVA ISDYRSRLLA  420
SSFLWLRRSD LWDRQP
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678440121
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011077152.11e-140transcription factor HBP-1b(c38)-like
SwissprotQ6IVC31e-115TGA22_ORYSJ; Transcription factor TGA2.2
TrEMBLB9HJ061e-133B9HJ06_POPTR; Uncharacterized protein
STRINGPOPTR_0008s11710.11e-134(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36832340
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-106bZIP family protein
Publications ? help Back to Top
  1. Chern M,Fitzgerald HA,Canlas PE,Navarre DA,Ronald PC
    Overexpression of a rice NPR1 homolog leads to constitutive activation of defense response and hypersensitivity to light.
    Mol. Plant Microbe Interact., 2005. 18(6): p. 511-20
    [PMID:15986920]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]