PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678423765
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family CPP
Protein Properties Length: 693aa    MW: 75442.8 Da    PI: 6.7747
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678423765genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR322.5e-10472493122
        TCR   1 kekkgCnCkkskClkkYCeCfa 22 
                ++k+gCnCk+s ClkkYCeC++
  678423765 472 RHKRGCNCKRSGCLKKYCECYQ 493
                589******************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS516349.145438515IPR005172CRC domain
SMARTSM011141.7E-8472542IPR033467Tesmin/TSO1-like CXC domain
PfamPF036381.2E-6474493IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 693 aa     Download sequence    Send to blast
MEDSDARSPT SMAKNAGRLT SLVCLDHPPS SSVSPAAWAS GGPSNESSNK YAKYNSITTA  60
ALSFLLFLSR SSYLFHPHLY LPNMASSSTL EALGSPQRIS NGVGAVDVED SPVFSFLNNL  120
SPIKPIRSTH IHHHQTINLL SFASLPSVFN SPHVGNSLRD SRCIPRQPSS RTDISSPDEG  180
GGEKENVDPR AALEALFAVS KHEINNSQCN NFSQKSPSII PDVEEGYEIS KGGALGDAQS  240
SIFDGQSLVL TPEAQSEVLA CKKRLAEFQD VNPCSSAADP DPFATMENEV SVSHICNLLQ  300
QLSVFYGGMR RCLVFEPTVS HLEDTRDSGF DSSMFPQPLG NSNHQLPVKR QSHSPLLHQL  360
LPAIGLHLNA LAASASERLR IGNDSSSTSS FVSPNPELMH NTYDYSCFGR EFATFDPPLR  420
DPFEELGIMI GGFAQTSSPK AKRMKIENPG GAESCKRFIL QDDLGKTPAS ARHKRGCNCK  480
RSGCLKKYCE CYQVPFLSPL CFHVIYVNGC WKLMEKAFLQ LQSGVGCSSN CRCEGCRNAF  540
GMKDDGKWCT VKESEDGNGM DMTDKELLSS SSFTSSVTAL HGDHVFSTAR YYHVYTHSPV  600
SLTIHAQDSS LCTFRPPGSS FFPAIGGSSS EWHSPADKSF LLPPFFQEGL PLGETTKTSS  660
PNGKRVSPPE MKSSGRRLKL ESICSFPPLF VDQ
Cis-element ? help Back to Top
SourceLink
PlantRegMap678423765
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22780.12e-26Tesmin/TSO1-like CXC domain-containing protein