PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678421660
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family NAC
Protein Properties Length: 301aa    MW: 33696 Da    PI: 6.6369
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678421660genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM170.36.2e-53181441127
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 
                lppGfrFhPtdeel+++yL +k+ + +l + +v+ evd+++vePwdLp k k +ekewyfF+k+ +ky+tg r+nrat++gyWkatgkdke++++ ++ l
  678421660  18 LPPGFRFHPTDEELITHYLFPKMMNGDLIT-RVMGEVDLNRVEPWDLPWKGKMGEKEWYFFCKKGRKYPTGLRTNRATDAGYWKATGKDKEIFRSkSEIL 116
                79*************************877.89***************8778899**************************************9845556 PP

        NAM 100 vglkktLvfykgrapkgektdWvmheyr 127
                +g+kktLvfy+grap+g+kt+Wvmhe+r
  678421660 117 IGMKKTLVFYQGRAPRGQKTNWVMHEFR 144
                ***************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.23E-6016168IPR003441NAC domain
PROSITE profilePS5100557.33418168IPR003441NAC domain
PfamPF023653.3E-2819144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MAGLATAEVA GDDEDLILPP GFRFHPTDEE LITHYLFPKM MNGDLITRVM GEVDLNRVEP  60
WDLPWKGKMG EKEWYFFCKK GRKYPTGLRT NRATDAGYWK ATGKDKEIFR SKSEILIGMK  120
KTLVFYQGRA PRGQKTNWVM HEFRSYPMQN HPNISTTDEW VISRVFKKSS GGKKVHISDL  180
LKAPGSSGAS RSSTDLPPVT DMAEGSRATC FSNSAEEIPG QSPPSSIKSE ANSNTYYDPI  240
MPRQQSLLSL LLENEEYFPV FAGGTSISGP GFQPINDHPQ THLLTTDSGG FDSPWNYSLL  300
E
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4dul_B3e-501617415171NAC domain-containing protein 19
4dul_A3e-501617415171NAC domain-containing protein 19
1ut7_B3e-501617415171NO APICAL MERISTEM PROTEIN
1ut7_A3e-501617415171NO APICAL MERISTEM PROTEIN
1ut4_B3e-501617415171NO APICAL MERISTEM PROTEIN
1ut4_A3e-501617415171NO APICAL MERISTEM PROTEIN
3swp_D3e-501617418174NAC domain-containing protein 19
3swp_C3e-501617418174NAC domain-containing protein 19
3swp_B3e-501617418174NAC domain-containing protein 19
3swp_A3e-501617418174NAC domain-containing protein 19
3swm_D3e-501617418174NAC domain-containing protein 19
3swm_C3e-501617418174NAC domain-containing protein 19
3swm_B3e-501617418174NAC domain-containing protein 19
3swm_A3e-501617418174NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009761662.15e-98PREDICTED: NAC domain-containing protein 100-like
RefseqXP_011098651.17e-98PREDICTED: NAC domain-containing protein 100-like
RefseqXP_016437736.15e-98PREDICTED: NAC domain-containing protein 92-like
SwissprotQ9FLR31e-87NAC79_ARATH; NAC domain-containing protein 79
TrEMBLA0A022R0274e-91A0A022R027_ERYGU; Uncharacterized protein
TrEMBLF6H5V07e-91F6H5V0_VITVI; Putative uncharacterized protein
STRINGVIT_14s0108g01070.t012e-90(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15224279
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07680.14e-87NAC domain containing protein 80