PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678383022
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bZIP
Protein Properties Length: 165aa    MW: 19236.5 Da    PI: 6.1171
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678383022genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.83.1e-1579137563
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                ++ rr+++NRe+ArrsR RK+  +++L   v  L  eN++L++el++l+++ +++ +e+
  678383022  79 RKRRRMISNRESARRSRMRKQRHMDQLWSMVVCLRIENQQLRDELNRLSENHEQVLQEN 137
                5789**************************************************99998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-1375139IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.24377140IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.1E-1277132No hitNo description
SuperFamilySSF579598.16E-1279130No hitNo description
PfamPF001702.1E-1379137IPR004827Basic-leucine zipper domain
CDDcd147024.72E-1680130No hitNo description
PROSITE patternPS0003608297IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    Send to blast
MTEISEHHLF SSTNVQFLDC VSFATNIVPS YNLNGCQSKL FQLQGEPQLQ EVCLKTTSVS  60
TNSTSDEADE QQQSIINERK RRRMISNRES ARRSRMRKQR HMDQLWSMVV CLRIENQQLR  120
DELNRLSENH EQVLQENAQL KEEASEFQQA LTDIQLSSPY VARFA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17882RKRRR
29198RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678383022
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011099071.13e-60basic leucine zipper 43
SwissprotQ9FMC29e-33BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A4D9B9G08e-59A0A4D9B9G0_SALSN; Uncharacterized protein
STRINGMigut.H00570.1.p5e-55(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9472492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.13e-47basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]