PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678378414
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family NAC
Protein Properties Length: 288aa    MW: 32858.8 Da    PI: 6.1835
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678378414genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1806.1e-56111361128
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100
                lppGfrFhPtdeel+++yL +k+ +++++   v+ +vd++kvePwdLp k+k +ekewyfF+ +d+ky+tg+r+nrat++gyWkatgkdke+++ ++ lv
  678378414  11 LPPGFRFHPTDEELITHYLSPKLVDSNFSS-IVMGDVDLNKVEPWDLPWKAKIGEKEWYFFCIKDRKYPTGSRTNRATEAGYWKATGKDKEIFR-GKVLV 108
                79*************************999.89***************98999*****************************************.99*** PP

        NAM 101 glkktLvfykgrapkgektdWvmheyrl 128
                g+kktLvfykgrap+gekt+Wvmheyr+
  678378414 109 GMKKTLVFYKGRAPRGEKTNWVMHEYRV 136
                **************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.35E-619163IPR003441NAC domain
PROSITE profilePS5100557.94611163IPR003441NAC domain
PfamPF023654.2E-2912136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MDGERDEALI LPPGFRFHPT DEELITHYLS PKLVDSNFSS IVMGDVDLNK VEPWDLPWKA  60
KIGEKEWYFF CIKDRKYPTG SRTNRATEAG YWKATGKDKE IFRGKVLVGM KKTLVFYKGR  120
APRGEKTNWV MHEYRVESMD SSHNPSSRVA NKSEWVINRV FKKGSNGKKV HISGLSESPS  180
SCSSVQPPFI DLPSTAVAEV TSFSNSQEER EMGGELSPFE GHSSCRESVF PQDQSFLTLL  240
LENYRSYARQ HGGEDGFLPE SDLSAAFADG FRPWYEQEYL ITDWITNR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-53916915171NO APICAL MERISTEM PROTEIN
1ut4_B2e-53916915171NO APICAL MERISTEM PROTEIN
1ut7_A2e-53916915171NO APICAL MERISTEM PROTEIN
1ut7_B2e-53916915171NO APICAL MERISTEM PROTEIN
3swm_A2e-53916918174NAC domain-containing protein 19
3swm_B2e-53916918174NAC domain-containing protein 19
3swm_C2e-53916918174NAC domain-containing protein 19
3swm_D2e-53916918174NAC domain-containing protein 19
3swp_A2e-53916918174NAC domain-containing protein 19
3swp_B2e-53916918174NAC domain-containing protein 19
3swp_C2e-53916918174NAC domain-containing protein 19
3swp_D2e-53916918174NAC domain-containing protein 19
4dul_A2e-53916915171NAC domain-containing protein 19
4dul_B2e-53916915171NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009761662.11e-100PREDICTED: NAC domain-containing protein 100-like
RefseqXP_016437736.11e-100PREDICTED: NAC domain-containing protein 92-like
SwissprotQ9FLR31e-90NAC79_ARATH; NAC domain-containing protein 79
TrEMBLA0A068U1T71e-102A0A068U1T7_COFCA; Uncharacterized protein
STRINGSolyc02g088180.2.14e-95(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15224279
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.14e-89NAC domain containing protein 100