PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678328577
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bZIP
Protein Properties Length: 170aa    MW: 19486.9 Da    PI: 5.9351
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678328577genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1445e-1474126557
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                +++rr+++NRe+ArrsR RK+  ++eL   v  L +eN++L++el + ++  +
  678328577  74 RKQRRMISNRESARRSRIRKQRHLDELCSQVIFLIKENRQLIDELRRVSESHD 126
                689*****************************************999888665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.7E-1470134IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.8E-1172124No hitNo description
PROSITE profilePS5021710.58872135IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.03E-1274123No hitNo description
PfamPF001703.3E-1174126IPR004827Basic-leucine zipper domain
CDDcd147023.92E-1875126No hitNo description
PROSITE patternPS0003607792IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MQPTQLSEYP PIPSLIPFPD LSWFGGSIFP APCDSSGFPG ALLQHQVTAK ATCFSSNSTS  60
DEAEEQQMSI IHERKQRRMI SNRESARRSR IRKQRHLDEL CSQVIFLIKE NRQLIDELRR  120
VSESHDHVVQ ENVQLREEAL ELRRMLTDTQ ISSPFTSLAQ LDDHPCNDSV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18693RRSRIRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00389DAPTransfer from AT3G30530Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap678328577
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011099071.11e-59basic leucine zipper 43
SwissprotQ9FMC27e-34BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A4D9BU755e-57A0A4D9BU75_SALSN; Uncharacterized protein
STRINGMigut.H00570.1.p8e-53(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9472492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.12e-38basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]