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Plant Transcription
Factor Database
v4.0
Previous version: v1.0,
v2.0,
v3.0
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Home BLAST Prediction RegMap ATRM Download Help About Links |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678323129 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | NAC | ||||||||
Protein Properties | Length: 397aa MW: 44128.5 Da PI: 5.0432 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 161 | 4.5e-50 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 lppGfrFhPtd elv++yLk+kv+gkkl++ e+i+ev+iy++ PwdLp +++k++++ew+fF++r+kkya+g r +rat++gyWk+tgk ++v + +g+ 678323129 6 LPPGFRFHPTDTELVMYYLKRKVTGKKLHF-EAIAEVNIYQFSPWDLPdmSCLKSKDREWFFFCPREKKYASGVRVKRATENGYWKTTGKGRPVSH-NGQ 103 79**************************99.89**************9644889999**************************************9.999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 vg+ ktLvf+ g++p+g++tdWv+heyr+ 678323129 104 IVGMVKTLVFHLGHSPNGRRTDWVIHEYRI 133 ****************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.75E-57 | 4 | 155 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 54.579 | 6 | 155 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.2E-26 | 7 | 133 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 397 aa Download sequence Send to blast |
MGKAFLPPGF RFHPTDTELV MYYLKRKVTG KKLHFEAIAE VNIYQFSPWD LPDMSCLKSK 60 DREWFFFCPR EKKYASGVRV KRATENGYWK TTGKGRPVSH NGQIVGMVKT LVFHLGHSPN 120 GRRTDWVIHE YRIVDKAIAS ADHLETYTLC KVFEKSGMGP KNGAQYGAPF NEAEWSDDED 180 EPVKIQSPAL ETQLPQCQGV PSLSAGQLST DVPVIENDHE IEHMLSHFTD DPIFSLDAAS 240 KQGAHVEAVK SHPSSDGFDL YDGLDDLDIH PRLNEDHLYL SGMHHENNEL NPLFLDEMGY 300 IELDDLMGPL TSSAEELLFG CYGANRFQQL NHQGTGLNQY PLSSAPLPPF PTGTMGTAGN 360 PELPQTTMPS TSGCYELLPA SNAATACGSE QLPPPQQ |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-46 | 6 | 156 | 15 | 169 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012853700.1 | 1e-115 | PREDICTED: NAC domain-containing protein 89-like isoform X2 | ||||
Swissprot | Q9FY82 | 8e-83 | NAC82_ARATH; NAC domain-containing protein 82 | ||||
TrEMBL | S8E9C0 | 1e-119 | S8E9C0_9LAMI; Nam-like protein 2 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6050 | 23 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G09330.4 | 2e-83 | NAC domain containing protein 82 |