PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678314388
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family WRKY
Protein Properties Length: 274aa    MW: 31355.2 Da    PI: 7.1399
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678314388genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.85.4e-2998157260
                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60 
                +D ++WrK+GqK++kgs++prsYYrC+s+ gC+++k+ve+s +dp+ ++itY+geH h+k
  678314388  98 SDVWAWRKFGQKPIKGSPYPRSYYRCSSSkGCSARKQVEQSCTDPRKFIITYTGEHSHSK 157
                79*************************998****************************85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.6E-2984158IPR003657WRKY domain
PROSITE profilePS5081132.29492158IPR003657WRKY domain
SuperFamilySSF1182905.62E-2594158IPR003657WRKY domain
SMARTSM007746.2E-3297157IPR003657WRKY domain
PfamPF031061.3E-2499155IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MAGFDEEDLR EWSLEGWKDD VEEKSGKGQR SLEWFPDSSE VSNREPFYPH PLPSSAVLRF  60
QERRNGKDAA DDHLSGGKKR KSQQKRVAVH VSAGELTSDV WAWRKFGQKP IKGSPYPRSY  120
YRCSSSKGCS ARKQVEQSCT DPRKFIITYT GEHSHSKPTR RNSLPGTVGL KFPVTNRCSR  180
PERNVSATDV GRGVKEERQS PESEAVVKNV TSEDHEDDML ISEFLMNDDF FSGLEELDEF  240
FRIQIVKTDA FINICLLVLF CFLFKGHFQY LCPL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-18951581577Probable WRKY transcription factor 4
2lex_A1e-18951581577Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011081142.13e-58PREDICTED: probable WRKY transcription factor 29
SwissprotO046091e-43WRK22_ARATH; WRKY transcription factor 22
TrEMBLA0A0D5Y9B86e-60A0A0D5Y9B8_SALMI; WRKY protein
STRINGVIT_02s0025g00420.t017e-49(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA57812335
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.14e-33WRKY family protein