PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678309542
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family NAC
Protein Properties Length: 346aa    MW: 39013.9 Da    PI: 5.4903
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678309542genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM113.62.1e-35161473128
        NAM   3 pGfrFhPtdeelvveyLkkkvegkk...leleev.ikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 
                +G+rF Ptd el+ e L +k+ ++     ++++  i+ v+iy++ P+dL  k +k +++ewyf+++r +ky++g r++ra+ +gyWkatg dk+v+++  
  678309542  16 KGYRFVPTDVELI-ELLSEKIGEEAaaiPPVNHPdISVVNIYHHRPEDLAgKYHKLGDDEWYFYTPRGRKYKNGVRPSRAAGEGYWKATGADKDVTVEde 114
                7************.99*****99997864554556**************9666677999*************************************9977 PP

        NAM  96 ...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                   +++++g +k Lvfy+g+++k   tdW+mhe+r+
  678309542 115 nsgEKTVIGYRKALVFYTGNDRK---TDWIMHEFRA 147
                7666666**********877655...********96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.76E-3912157IPR003441NAC domain
PROSITE profilePS5100539.88814203IPR003441NAC domain
PfamPF023651.3E-1916146IPR003441NAC domain
SuperFamilySSF1019418.76E-39191203IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MTLKERKPCL DMGYKKGYRF VPTDVELIEL LSEKIGEEAA AIPPVNHPDI SVVNIYHHRP  60
EDLAGKYHKL GDDEWYFYTP RGRKYKNGVR PSRAAGEGYW KATGADKDVT VEDENSGEKT  120
VIGYRKALVF YTGNDRKTDW IMHEFRANAP PRKRLSPDDM VVRHGGFFFR VLDSQMGLSI  180
CMYISTWMLL QLDDYVLCKI YEKKEKKRKK RDEEEEEGVN QHPEACKSDM SAPAPAAAVE  240
GGRGASDCMP DNYATWVDPE TEYDLSNFCN YEKQQQQLQA DAVFLMGNGY STPSDLNFGA  300
DTVSLSSFLS PPGKANMSSF QLHFKSIQEA AGTKDPSPPE PTATVT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A8e-3112094171NO APICAL MERISTEM PROTEIN
1ut4_B8e-3112094171NO APICAL MERISTEM PROTEIN
1ut7_A8e-3112094171NO APICAL MERISTEM PROTEIN
1ut7_B8e-3112094171NO APICAL MERISTEM PROTEIN
3swm_A8e-3112097174NAC domain-containing protein 19
3swm_B8e-3112097174NAC domain-containing protein 19
3swm_C8e-3112097174NAC domain-containing protein 19
3swm_D8e-3112097174NAC domain-containing protein 19
3swp_A8e-3112097174NAC domain-containing protein 19
3swp_B8e-3112097174NAC domain-containing protein 19
3swp_C8e-3112097174NAC domain-containing protein 19
3swp_D8e-3112097174NAC domain-containing protein 19
4dul_A8e-3112094171NAC domain-containing protein 19
4dul_B8e-3112094171NAC domain-containing protein 19
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1202210KKEKKRKKR
2205209KKRKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.18e-35NAC domain containing protein 47