PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678294088
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bZIP
Protein Properties Length: 416aa    MW: 46948.3 Da    PI: 8.5639
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678294088genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.11.2e-10100136238
                XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeL 38 
                k+ k+ rr+++NReAAr+sR+RKka++++Le+  k L
  678294088 100 KPEKVLRRLAQNREAARKSRLRKKAYVQQLETCNKRL 136
                677999*************************865555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.0E-898148No hitNo description
SMARTSM003383.5E-599159IPR004827Basic-leucine zipper domain
PfamPF001701.0E-7100137IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.53E-6105142No hitNo description
PROSITE patternPS000360106121IPR004827Basic-leucine zipper domain
PfamPF141444.2E-26215289IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    Send to blast
MAIVLVSYMV QSVGDPEFHA QESSRRRMKS GTTQFVPKGR ISFCDPLHQM AMWGDFKANA  60
YVDSSLPIIL DFEQKHSNQS EEASQGALSA SHKCDQGHKK PEKVLRRLAQ NREAARKSRL  120
RKKAYVQQLE TCNKRLMQLE QEVDQARQQG LYAGGSCDAA QIPAPGTTNQ SEYYYIPHRV  180
VWSTPHHSLP PRCRVDAAAF EDLYGRWLEK QNRLISELRN ALHSNTGDAE LRVHVDSALR  240
HYFDLFSMKA SAAKADAFYV MSGLWITLGE RFFFWIGGFR PSEILKMLVP HLEPMTDEQH  300
LDIFTLRQSC QQAEDALTKG MEKLQQNVAD TLISGQLGDG NNAHEATAAM EKLEALVRFV  360
VQADNLRQGT LQQISRILTI RQAARGLLVL GDYIQRLQGL SSVWSKRHSD ASSTGM
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678294088
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011097616.11e-154TGACG-sequence-specific DNA-binding protein TGA-1A isoform X3
SwissprotQ392371e-134TGA1_ARATH; Transcription factor TGA1
TrEMBLA0A2G9GCL21e-154A0A2G9GCL2_9LAMI; Uncharacterized protein
STRINGXP_008234510.11e-144(Prunus mume)
STRINGEMJ066051e-144(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7802497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.51e-136bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Herrera-Vásquez A, et al.
    Transcriptional Control of Glutaredoxin GRXC9 Expression by a Salicylic Acid-Dependent and NPR1-Independent Pathway in Arabidopsis.
    Plant Mol. Biol. Rep., 2018.
    [PMID:26696694]
  4. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  5. Sun T, et al.
    TGACG-BINDING FACTOR 1 (TGA1) and TGA4 regulate salicylic acid and pipecolic acid biosynthesis by modulating the expression of SYSTEMIC ACQUIRED RESISTANCE DEFICIENT 1 (SARD1) and CALMODULIN-BINDING PROTEIN 60g (CBP60g).
    New Phytol., 2018. 217(1): p. 344-354
    [PMID:28898429]