PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678293911
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family NAC
Protein Properties Length: 142aa    MW: 15837.1 Da    PI: 5.8568
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678293911genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM362e-1180134148
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.vikev.diykvePwdLp 48 
                lp+G++F+Ptd+el+ e+L++kvegk+      ++++  +i+   +i++++P++Lp
  678293911  80 LPAGVKFDPTDQELI-EHLEAKVEGKEskshplIDEFIpTIEGEdGICYTHPEKLP 134
                799************.99*********6665443333333666646*********9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.96E-1167137IPR003441NAC domain
PROSITE profilePS5100512.21580142IPR003441NAC domain
PfamPF023653.0E-481114IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    Send to blast
MSKSKSSCDL IDSRMEEHQL CGSKHCPGCG HKLDGKPVSS FLFFSTGKTR AHDSGRSWVF  60
VLAVEVVVIT MAWWKDWVGL PAGVKFDPTD QELIEHLEAK VEGKESKSHP LIDEFIPTIE  120
GEDGICYTHP EKLPGSYPVF VF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011078230.12e-48PREDICTED: uncharacterized protein LOC105162027 isoform X2
TrEMBLA0A068U3X83e-50A0A068U3X8_COFCA; Uncharacterized protein
STRINGSolyc05g026180.1.12e-46(Solanum lycopersicum)
STRINGPGSC0003DMT4000435211e-46(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40572444
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.11e-46NAC domain containing protein 75