PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_32773-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GeBP
Protein Properties Length: 345aa    MW: 37876.4 Da    PI: 5.1919
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_32773-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573107.97.1e-3464163297
           DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifel 91 
                      lfqrlw+eeDeiv+L+++ +f+a++g+   +++ d++ fye +++++++++sksql eK+rrLK+K++++v++ + sg+ +sf+++h+q +fe+
  TRIUR3_32773-P1  64 LFQRLWTEEDEIVILRAFAEFTAQRGTafASHQyDTEPFYEEMRRRLQLDFSKSQLAEKLRRLKRKYRNCVERlRCSGNTFSFRSPHEQAVFEI 157
                      79*************************9977778***************************************8889***************** PP

           DUF573  92 skkiWg 97 
                      ++ iW+
  TRIUR3_32773-P1 158 ARNIWR 163
                      *****8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.1E-3065162IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MVDDPSAAGA AASSSFPDAD AYGNGDSEDI EFPVDPIPNP PFSSSAPVAA PASATATVGE  60
RRPLFQRLWT EEDEIVILRA FAEFTAQRGT AFASHQYDTE PFYEEMRRRL QLDFSKSQLA  120
EKLRRLKRKY RNCVERLRCS GNTFSFRSPH EQAVFEIARN IWRPSSDKHG RDPNAADSED  180
DATITATNAA ANGDAKSPSS SKAHRRGRRR RTADLAADAS EGPQPYISGP MPVKTEDSLP  240
AFFPQVSMDG AEPVVAPVVN TESSVLTPLF KEMVRAMLGI GGCPSPLGLG AKVREQPSAV  300
LGIPMEGEKW RQQRILELEV YLRRIDLLQD EVKSALEELK STPPT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2509220.0AK250922.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf98d18, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020169680.10.0probable transcription factor At3g04930
RefseqXP_020169681.10.0probable transcription factor At3g04930
TrEMBLM7YGN80.0M7YGN8_TRIUA; Uncharacterized protein
STRINGTRIUR3_32773-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97437123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.12e-44DNA-binding storekeeper protein-related transcriptional regulator