PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_26386-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family CAMTA
Protein Properties Length: 1159aa    MW: 127795 Da    PI: 5.6776
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_26386-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1172.37.1e-541492643117
             CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 
                      +e k+rwlk++e++ iL n+e+ ++t+e++++p+sg+l+Lynr++ r+frkDGy w++kkdg+tv E+he+LKvg++++l+cyYah+e+np fq
  TRIUR3_26386-P1 149 REaKSRWLKPSEVYYILLNHEQLQITHEPPNKPPSGALFLYNRRVNRFFRKDGYAWRRKKDGRTVGEAHERLKVGNIDALSCYYAHGEQNPYFQ 242
                      4559****************************************************************************************** PP

             CG-1  96 rrcywlLeeelekivlvhylev 117
                      rrc+w+Le ++++ivlv+y+ev
  TRIUR3_26386-P1 243 RRCFWMLEPAYDHIVLVQYREV 264
                      ********************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143776.685144270IPR005559CG-1 DNA-binding domain
SMARTSM010761.7E-69147265IPR005559CG-1 DNA-binding domain
PfamPF038592.1E-46150263IPR005559CG-1 DNA-binding domain
SuperFamilySSF812969.8E-16586668IPR014756Immunoglobulin E-set
PfamPF018336.1E-7586667IPR002909IPT domain
Gene3DG3DSA:2.60.40.101.0E-6586677IPR013783Immunoglobulin-like fold
Gene3DG3DSA:1.25.40.201.7E-15778872IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484033.11E-15779874IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029715.804780872IPR020683Ankyrin repeat-containing domain
CDDcd002041.59E-9785872No hitNo description
PROSITE profilePS5008811.167813845IPR002110Ankyrin repeat
SMARTSM002489.9E-5813842IPR002110Ankyrin repeat
PfamPF136373.3E-5815872No hitNo description
SMARTSM0001533933955IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.218934963IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525401.38E-69801039IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000156.99931013IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.4629931021IPR000048IQ motif, EF-hand binding site
PfamPF006120.00319941012IPR000048IQ motif, EF-hand binding site
SMARTSM000153.0E-610141036IPR000048IQ motif, EF-hand binding site
PROSITE profilePS5009610.4210151043IPR000048IQ motif, EF-hand binding site
PfamPF006123.8E-510161036IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1159 aa     Download sequence    Send to blast
MACCSAVSAA WATVKSASTS SMLKPGADAS SYSGYSSSSS SGSATSIGAG CCSSPSSSAA  60
FSSSFSGSSK SRDSPTATPA ACAACLAWIS CSIWYRRSGV SIVCVVMFCW TIAKLESVGR  120
EAERERWGGW ARAGGAERRE GFDINVLLRE AKSRWLKPSE VYYILLNHEQ LQITHEPPNK  180
PPSGALFLYN RRVNRFFRKD GYAWRRKKDG RTVGEAHERL KVGNIDALSC YYAHGEQNPY  240
FQRRCFWMLE PAYDHIVLVQ YREVAEGRYY STLSNGSAGS LSTLSYPNDI HGKHGSTSDF  300
SEGNESHQSS VTEVSSYSAN KEYNHDSGVL LSIPELQQST VMGMPELDQS SLERSSEFCM  360
VNNNDSTNTS GLNQALKSIA EQLSLGDDDY IYINQARSLD FTTNTEAADV QGNQTSNSLG  420
DDEANQIRPE GAHGVGRGIS SSWENVLQSD LGLPASSTYQ FGAHYQQSSE YQPPGGLDGS  480
NLQLQISAAK RFLLGSEDPI DSPSYNFIPR DEGINGINTL SAHDSSLESC LNPDWQRTTP  540
VTLQSSSYQS NSCGYEISEF FDNGQFELSS EEDTRLALKQ KQQFSIREIS PEWAFCYEIT  600
KVIITGDFLC DPSNICWAVM FGDTEVPVEI VQPGVLRCHT PLHSAGKLTL CISTGNRKVC  660
SEIKDFEFRA KSTASSFTDF APSSMKSTEE LSLLAKFARI LLCDNGSSAA SGDDPQPGQS  720
PKLKMNEDNW QRLINELDVG CENPPSRVDW IMEELLKSKL QQWLSLRLQG DDGTCSLSKN  780
EQGIIHLISA LGYDWALSSV LSAGVGINLR DSNGWTALHW AAYYGREKMV AALLAAGASA  840
PAVTDPTAQD PVGKSAAFLA SERGHVGLAG YLSEVALTSY LASLTIEESG ISEGLAAIKA  900
ERAVESISRR SAQLHGGTED ELSLKDSLAA VRNAAQAAAR IQNAFRAFSF RRRQHKDARL  960
KDEYGMTQED IDELAAASRL YYQHHVSNGQ FCDKAAVSIQ KKYRGWKGRK NFLQMRRNVV  1020
KIQAHVRGHQ VRKKYKTFVS TVSVLEKVIL RWRRKGHGLR GFRAEQSVMI EAEEGEEEDD  1080
DDFEDDEAVK IFRRQKVDES VKESVSRVLS MVDSPEARMQ YRRMLEEFRQ ATAELGASDK  1140
ATSSILDNDL LVENNKFTC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010239809.10.0PREDICTED: calmodulin-binding transcription activator 4 isoform X1
TrEMBLM8A8K20.0M8A8K2_TRIUA; Calmodulin-binding transcription activator 1
STRINGMLOC_58709.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62383241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09410.12e-94ethylene induced calmodulin binding protein