PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_24613-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 237aa    MW: 26332.6 Da    PI: 9.9053
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_24613-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.58.1e-103559327
                     XXCHHHCHHHHHHHHHHHHHHHHHH CS
           bZIP_1  3 elkrerrkqkNReAArrsRqRKkae 27
                     + k  rr+++NReAAr+sR+RKka 
  TRIUR3_24613-P1 35 DAKTLRRLAQNREAARKSRLRKKAA 59
                     67999******************85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077162.1E-53458IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.7E-43858No hitNo description
PROSITE patternPS0003604055IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    Send to blast
MTAPGGKATV KREGSGSGGA GTPSTSEQEG PRTPDAKTLR RLAQNREAAR KSRLRKKAAW  60
FDGEYARWVD EHDRMMRHLR AAVDAEGVEH DAAVMARHME PLTEQQAAGM YDLQRWAQER  120
EEALDRELQA TYRSLSDTVS SDALISPYPD TAAYMAHMSL AISNLSSLEA FVRQADALRL  180
QTLHRRPQVL TARQAARCFL AVADYSQRLR ALSSLWLARP RQDQPAPPGA GGRLFHP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3689310.0AK368931.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2082I06.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012704240.17e-78PREDICTED: transcription factor TGA2-like isoform X4
SwissprotO241605e-45TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLM8AM871e-172M8AM87_TRIUA; TGACG-sequence-specific DNA-binding protein TGA-2.1
STRINGMLOC_58614.21e-128(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27323669
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.22e-29bZIP family protein