PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_23486-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 253aa    MW: 27385.6 Da    PI: 5.8967
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_23486-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.12.2e-091001401252
                      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  12 kNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                       NR A r++R++Kka ++ Lee+v+ L+a N++L k+l++ 
  TRIUR3_23486-P1 100 GNRAAVRKYREKKKAHTALLEEEVAHLKAVNQQLVKKLQSH 140
                      4**********************************999864 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.3E-989156IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.8E-1489157No hitNo description
PfamPF077162.3E-1394146IPR004827Basic-leucine zipper domain
CDDcd146863.02E-1294148No hitNo description
SuperFamilySSF579599.6E-895141No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071294Biological Processcellular response to zinc ion
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MDDGDIDFSN PETFLCEAMG NDPPASCSMG SYFDDILNSD ADHLACTHTH TCNPPVHDLA  60
HHTHTCVHVH TKILSASDDA AETSESLPEG GATKKQRPSG NRAAVRKYRE KKKAHTALLE  120
EEVAHLKAVN QQLVKKLQSH SALEAEVARL RCLLVDIRGR IEGEIGTFPY QRTVKSNDFV  180
DQGSFLGGAQ VMNSCDFRCN DQLYCNPGMQ QARTMEDDGV MSGQVLGQGA GDSMGCVKPG  240
SLNPPGCRGG QML
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3535840.0AK353584.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1001E08.
GenBankAK2530860.0AK253086.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf120g05, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012704120.11e-128PREDICTED: uncharacterized protein LOC101781993
SwissprotQ8VY763e-71BZP19_ARATH; Basic leucine zipper 19
TrEMBLM8A6M20.0M8A6M2_TRIUA; Uncharacterized protein
STRINGSi037105m1e-127(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP41753572
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35040.11e-59bZIP family protein