PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_21992-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 398aa    MW: 44479.4 Da    PI: 4.6985
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_21992-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM108.67.2e-34121511128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.....leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....sgy 82 
                      lp+G++F+P+d+el+ + L+k+ ++ +     ++++   +ke+ +i++++P++Lp  vk++ +  +fF+++ k+y+tg+rk+r+++     + +
  TRIUR3_21992-P1  12 LPKGVKFDPSDQELLGHLLAKHDKAGSqphpfIDEFIPtVKEAdGICYTHPQKLP-GVKQDGSVSHFFHRTFKAYNTGTRKRRKINtsdlaDVR 104
                      799************999987655444456553333334777756**********.677888899******************75444555889 PP

              NAM  83 WkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                      W++tgk+k+v++ +g++ g+kk++v+y  + +  k++kt+Wvmh+y+l
  TRIUR3_21992-P1 105 WHKTGKTKPVMV-DGQHLGCKKIMVLYmsTVKGGKPKKTNWVMHQYHL 151
                      ************.999***********6644666777*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.12E-365170IPR003441NAC domain
PROSITE profilePS5100531.55212170IPR003441NAC domain
PfamPF023658.5E-1513151IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000077Biological ProcessDNA damage checkpoint
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010332Biological Processresponse to gamma radiation
GO:0040020Biological Processregulation of meiotic nuclear division
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    Send to blast
MPSKVVHQWP GLPKGVKFDP SDQELLGHLL AKHDKAGSQP HPFIDEFIPT VKEADGICYT  60
HPQKLPGVKQ DGSVSHFFHR TFKAYNTGTR KRRKINTSDL ADVRWHKTGK TKPVMVDGQH  120
LGCKKIMVLY MSTVKGGKPK KTNWVMHQYH LGTGEDEQNG EYVVSKLFFQ QQNGEKSALE  180
LTNTDVMQTT VAEADLTDLP EPTAEEEDER ISSISNQEFL LNNEYNADEE ALHSHEHNTY  240
QENGDCEIKM EEKAADENAV YPSSEKPEDG DNPPSQDPNL WEGDSQFLLD SQQLAENLAI  300
CDEFLQSQTS CGDGDEPGSI KPRLAVYAQL PVEDLKKDLQ EYKDLGPSDN ANLEPENNAE  360
LRLSQLFSLS TLGLLIRALL AGIFTGQLYD GNFHRAGG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP7291471e-107KP729147.1 Stipa purpurea microsatellite ZH4 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004965197.10.0PREDICTED: NAC domain-containing protein 8-like
SwissprotQ6NQK21e-102NAC8_ARATH; NAC domain-containing protein 8
TrEMBLM8A1260.0M8A126_TRIUA; NAC domain-containing protein 8
STRINGSi006639m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP67853651
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.11e-100NAC family protein