PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_12850-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 195aa    MW: 21283.8 Da    PI: 7.3824
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_12850-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.61.1e-0782128551
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                       + rr   NR A r++R++Kk+ ++ L+e+++ L a N++L k+++ 
  TRIUR3_12850-P1  82 SKKRRPSGNRAAVRKYREKKKEHTAVLQEEAARLRAMNEQLTKKVQD 128
                      56677788*********************************999874 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.9E-772145IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.9E-1380146No hitNo description
PROSITE profilePS502178.70380127IPR004827Basic-leucine zipper domain
PfamPF077164.6E-1282127IPR004827Basic-leucine zipper domain
CDDcd146862.50E-1183128No hitNo description
SuperFamilySSF579592.13E-690144No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MDDGDLDFSS MSMGSYFDDL LGGTAEHLAC CTHTHTCNPP AHDLPHTHTC HHVHSKFAAS  60
ASSDAAADSP TEPEDAHATS RSKKRRPSGN RAAVRKYREK KKEHTAVLQE EAARLRAMNE  120
QLTKKVQDHA ALEAEAARLR CLLVDVRGRI EGEIGAFPYQ RRPAKGDGPG SAGPVMMSSC  180
GFVRTCEQPP VCFHH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
194102RKYREKKKE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3547351e-173AK354735.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1010J17.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006656494.11e-69PREDICTED: uncharacterized protein LOC102721653
SwissprotQ8GTS22e-53BZP23_ARATH; Basic leucine zipper 23
SwissprotQ8VY763e-53BZP19_ARATH; Basic leucine zipper 19
TrEMBLM7YIU61e-143M7YIU6_TRIUA; Uncharacterized protein
STRINGSb10g030250.16e-69(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP41753572
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16770.12e-46bZIP family protein