PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_09546-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 467aa    MW: 51308.6 Da    PI: 6.434
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_09546-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.21e-09182222545
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                      k  rr+++NReAAr+sR+RKka+i++Le    +L++  ++L
  TRIUR3_09546-P1 182 KSLRRLAQNREAARKSRLRKKAYIQNLESSRLKLTQLEQEL 222
                      788*************************9777777666555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.7E-7178241IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.174180224IPR004827Basic-leucine zipper domain
CDDcd147083.91E-23182234No hitNo description
PfamPF001703.5E-7182222IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.31E-7182225No hitNo description
Gene3DG3DSA:1.20.5.1701.5E-7183226No hitNo description
PROSITE patternPS000360185200IPR004827Basic-leucine zipper domain
PfamPF141444.9E-32264339IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    Send to blast
MPGFGAPQHT MGLITDLWES VVLCPTDVNI MQPSRVADFG ALAHSAGFRI EDLANFSTNN  60
LFNLKPNTHA YTSEPLQFGN YGKSISPTDL ATTAAAAAAV TAVDPQALLQ QKGAQPNLVA  120
LRTHNNDNWG ESSMADTSPR TDTSTDPDID IDERNQMFEQ GQLAAPTASD SSDKSRDKLD  180
HKSLRRLAQN REAARKSRLR KKAYIQNLES SRLKLTQLEQ ELQRARQQGI FISSSGDQSQ  240
SAGGNGAVAF DMEYARWLEE HNKHINELRA AANAHAGDDD LRKIVDSIMA QYDEFFRLKG  300
VAAKADVFHV LSGMWKTPAE RCFMWLGGFR SSELLKLLAG QLEPLTEQQL TGICNLQQSS  360
QQAEDALSQG MEALQQSLAE TLSSGSLGPA GSSGNVASYM GQMAMAMGKL GTLENFLRQA  420
DNLRLQTLQQ MQRILTTRQS ARALLAISDY FSRLRALSSL WLARPRE
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00492DAPTransfer from AT5G06950Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankWHTHBP1BC10.0D12921.2 Triticum aestivum mRNA for transcription factor HBP-1b(c1), partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003564436.10.0PREDICTED: transcription factor HBP-1b(c1)
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLM7Z6D70.0M7Z6D7_TRIUA; Transcription factor HBP-1b(C1)
STRINGBRADI2G52860.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-123bZIP family protein