PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp57577_TGAC_v2_mRNA336
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 216aa    MW: 23691.1 Da    PI: 4.6225
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp57577_TGAC_v2_mRNA336genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.72.2e-162372255
                      AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                              ++GVr +k +g++v+eIr p++   r+r++lg++++ae+Aa+a +aa  +l+g
  Tp57577_TGAC_v2_mRNA336 23 LFRGVRKRK-WGKYVSEIRLPNS---RQRIWLGSYDSAEKAARAFDAATYCLRG 72
                             69****999.**********933...5************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.24E-262280No hitNo description
SuperFamilySSF541715.56E-192280IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.5E-272380IPR001471AP2/ERF domain
PfamPF008471.9E-92372IPR001471AP2/ERF domain
PROSITE profilePS5103220.5212380IPR001471AP2/ERF domain
SMARTSM003801.6E-282386IPR001471AP2/ERF domain
PRINTSPR003677.9E-92435IPR001471AP2/ERF domain
PRINTSPR003677.9E-94662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
LEILRMVKTN SEKPTAERSD ASLFRGVRKR KWGKYVSEIR LPNSRQRIWL GSYDSAEKAA  60
RAFDAATYCL RGSGAKFNFP GDPPSIAGGR SMTPSQIQEA AARFANSDIH NEKSGRPDNV  120
KVESESSEEG TLMLPMESPS PALSDATVQT DFDSKQNGLF SDLVGVNGSG YSGPDYNVFP  180
GFDDFGGDFY VPPSYDYGEE NMDGLIIHDS FLWNF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-1524801572Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00151DAPTransfer from AT1G19210Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp57577_TGAC_v2_mRNA336
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013463568.11e-122ethylene-responsive transcription factor ERF017
TrEMBLA0A2K3LHL11e-153A0A2K3LHL1_TRIPR; Ethylene-responsive transcription factor erf017-like protein
STRINGXP_004488106.11e-112(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14793399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74930.18e-48ERF family protein