PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp57577_TGAC_v2_mRNA21179
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
Family ARR-B
Protein Properties Length: 331aa    MW: 37864 Da    PI: 6.2918
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp57577_TGAC_v2_mRNA21179genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like67.71.9e-21134188155
                    G2-like   1 kprlrWt.peLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                k+rl W+ p+L e+F+++v+qL G++kAtPk+i +lm+v gLt ++v+SHLQk Rl
  Tp57577_TGAC_v2_mRNA21179 134 KNRLSWSdPKLKEQFLKVVNQL-GIDKATPKHITKLMNVRGLTQSQVASHLQKVRL 188
                                68****8689************.******************************997 PP

2Response_reg39.43.3e-1457639109
                                HHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS
               Response_reg  39 lkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109
                                l+e +  +D+i++  +mp+md +e+l++ ++e  k+pii+++  ++ + + + ++ Ga ++ +Kp + +++ +
  Tp57577_TGAC_v2_mRNA21179   5 LRETKgsFDVIVIEAQMPNMDSYEFLQRVTQEI-KIPIIMMGVDDTTNARMKSIEKGACEYWVKPLNVNHINN 76 
                                5444455**********************9988.9*******************************9998765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521721.01E-14184IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23002.5E-17189No hitNo description
CDDcd001565.25E-10174No hitNo description
PROSITE profilePS5011024.663182IPR001789Signal transduction response regulator, receiver domain
PfamPF000723.4E-9476IPR001789Signal transduction response regulator, receiver domain
Gene3DG3DSA:1.10.10.604.4E-21132190IPR009057Homeodomain-like
SuperFamilySSF466892.51E-13132191IPR009057Homeodomain-like
TIGRFAMsTIGR015575.2E-19134188IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
AVHLLRETKG SFDVIVIEAQ MPNMDSYEFL QRVTQEIKIP IIMMGVDDTT NARMKSIEKG  60
ACEYWVKPLN VNHINNMWQH VVTIQDQDQI CRILEVKTGL KIMKRNHETA TKETNAYVLE  120
KYSDNDHDQP PTKKNRLSWS DPKLKEQFLK VVNQLGIDKA TPKHITKLMN VRGLTQSQVA  180
SHLQKVRLGL KGKSKKTKLK KELSKSGKHN QYHVPNNESL EVVQSMPMPM PEQNESVEVV  240
QSMPMPEQNE SVEVVQSMPA AEQDQNVVPN SANIQCDYNI PAQAQQHENV FDDFDISKLF  300
TNETNMMVDG SSYLYDEAWH SSEYGTFDWC *
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp57577_TGAC_v2_mRNA21179
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z6LGU91e-114A0A2Z6LGU9_TRISU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.15e-36response regulator 2