PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp_un0744_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
Family bHLH
Protein Properties Length: 218aa    MW: 25245.9 Da    PI: 8.6207
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp_un0744_001genomethellungiellaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH309.6e-1088137155
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    r+r h + Er RR++ ++++  L +llP a     +K +K +i+ekAv+ I +L+
  Tp_un0744_001  88 RCRRHMMKERTRREKQKQSYLALHSLLPFA-----TKSDKNSIVEKAVDQIEKLE 137
                    6788**************************.....89**************9985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.4E-1282151IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.75E-985137No hitNo description
PROSITE profilePS5088813.14187136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.9E-788137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.3E-891155IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.7E-693142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    Send to blast
MDYFFLDSIC QEEEDKFWDL IAGDVSGNGD GDKTVSVPNR SAFRSYVKDT ELRMLSSSST  60
VNMKRRLVNL LRKNWEEKKN AAAPEKDRCR RHMMKERTRR EKQKQSYLAL HSLLPFATKS  120
DKNSIVEKAV DQIEKLEGIK KELERRMNVL EAKLAEDHDE MSGTKVRFNL QEPLCGIDSM  180
VEILQCLKSM GTKLKTVQAN FSRHEFSATM NIESQFII
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006403210.11e-127hypothetical protein EUTSA_v10003353mg
SwissprotQ9FIX51e-108BH092_ARATH; Transcription factor bHLH92
TrEMBLV4LXN51e-127V4LXN5_EUTSA; Uncharacterized protein
STRINGBra027501.1-P1e-114(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM96022537
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.11e-103bHLH family protein