PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp7g33840
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
Family bHLH
Protein Properties Length: 156aa    MW: 18113 Da    PI: 10.1421
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp7g33840genomethellungiellaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.52.8e-091461354
               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 +  rE+ RRd++N+ f eL   l ++     +K +Ka+iL  ++e +k+L
  Tp7g33840 14 IQKADREKIRRDKLNEQFLELGNALDPN----RPKSDKASILIDTIEILKDL 61
               56789********************997....79***************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.91E-61065No hitNo description
PROSITE profilePS5088812.9321161IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-141181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-121182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.9E-71461IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.7E-71767IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0009507Cellular Componentchloroplast
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    Send to blast
MVELKKEPLS SRKIQKADRE KIRRDKLNEQ FLELGNALDP NRPKSDKASI LIDTIEILKD  60
LMTQVNKLKA EYVTLSQESR ELIQEKSELR EEKTSLKSDI EILNSQYQHR VRTMVPWIPH  120
YTYPIPVVAR TQGPVSIQHL SSSSSVTTRI KKMMLV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006412028.11e-83hypothetical protein EUTSA_v10026039mg
SwissprotQ8W2F24e-72BH011_ARATH; Transcription factor bHLH11
TrEMBLV4P2B31e-83V4P2B3_EUTSA; Uncharacterized protein
STRINGBra017745.1-P6e-79(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM23532762
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36060.22e-73bHLH family protein