PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp7g32320
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
Family bHLH
Protein Properties Length: 341aa    MW: 38027.8 Da    PI: 5.8523
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp7g32320genomethellungiellaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.62.9e-10192239455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +h+++Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Tp7g32320 192 SHSIAERARREKISERMKYLQDLVPGC----AKITGKAGMLDEIINYVQSLQ 239
                8*************************8....688*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000838.39E-10186243No hitNo description
SuperFamilySSF474593.79E-16186255IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.7E-17188255IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.447188238IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.8E-8192239IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-8194244IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0009637Biological Processresponse to blue light
GO:0009911Biological Processpositive regulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MMMNDGFTEA ELLLNCTNMS VLERQRAHLK YHHPGLDSTL AGFFANSSTT NGGDIDGFLP  60
TAGLALPAIY VETMTESDAT LLIPPENITT SASFGSGNFK KRKFDSVFTE TKDCNEKKMM  120
MMNREEVVLG EEEEKSKITE QNNESSRSIT KMKNRAKKEQ NNCSNDSSKS TKESQKTDYI  180
HVRARRGQAT DSHSIAERAR REKISERMKY LQDLVPGCAK ITGKAGMLDE IINYVQSLQR  240
QVEFLSMKLA TVSPRVNFDI DDIFAKEVAS APVTNLPNTV MPSHEMVDSG YSHEMVNSGY  300
IHFNPMQHVA TSSDPLSCFN NGQAPSMWDS DVQNLYSSLG L
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006412217.10.0hypothetical protein EUTSA_v10025748mg
SwissprotQ8GY611e-167BH063_ARATH; Transcription factor bHLH63
TrEMBLV4LSU80.0V4LSU8_EUTSA; Uncharacterized protein
STRINGBra011540.1-P1e-173(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM59472543
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.11e-161cryptochrome-interacting basic-helix-loop-helix 1