PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp7g21770
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
Family WRKY
Protein Properties Length: 280aa    MW: 30846.5 Da    PI: 4.7857
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp7g21770genomethellungiellaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY48.41.9e-151301731959
                SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY  19 efprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                   rsYYrCt++   +C+++k v+rs++dp v+e+tY+g+H+++
  Tp7g21770 130 AKKRSYYRCTHRstqNCWATKLVQRSDSDPAVFEVTYRGTHTCS 173
                567********9999***************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007741.6E-14118174IPR003657WRKY domain
PROSITE profilePS5081112.059129170IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.7E-14130174IPR003657WRKY domain
PfamPF031065.0E-14130172IPR003657WRKY domain
SuperFamilySSF1182906.15E-13130173IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009816Biological Processdefense response to bacterium, incompatible interaction
GO:0010150Biological Processleaf senescence
GO:0010193Biological Processresponse to ozone
GO:0010200Biological Processresponse to chitin
GO:0031347Biological Processregulation of defense response
GO:0042542Biological Processresponse to hydrogen peroxide
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0009507Cellular Componentchloroplast
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MEGKKDMLSW EQKILLSELV LGLEATKKLQ TRLGESSSPP SSSSSSPVAE TNEVLLKQIL  60
SSYEKSLLML NWSSSPSVQL IPAAVAVVPV INSGGVPESP ASINGSPRSE EFFDGGGSSE  120
SHRQDHIFNA KKRSYYRCTH RSTQNCWATK LVQRSDSDPA VFEVTYRGTH TCSQAIAPPP  180
PPPASPEKRD TRPKPPTAQK PNEILESLKT SLTVRTDGLD DGDDFFSFPN TLPFYDYGTI  240
NSDFGGHMEC SPIFDVVDWF NPTVEMDTAF PTFLPDSIYY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006413515.11e-142hypothetical protein EUTSA_v10025724mg
SwissprotQ9SUP61e-129WRK53_ARATH; Probable WRKY transcription factor 53
TrEMBLV4MPJ61e-142V4MPJ6_EUTSA; Uncharacterized protein
STRINGBra019265.1-P1e-136(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19332783
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.11e-110WRKY family protein