PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp7g12010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
Family bHLH
Protein Properties Length: 332aa    MW: 36942.5 Da    PI: 6.1772
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp7g12010genomethellungiellaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.53.3e-10176223455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +h+++Er RR++i +++  L+ l+P +    ++   Ka +L + ++Y++sLq
  Tp7g12010 176 SHSIAERVRREKISERMKLLQNLVPGC----NRITGKAVMLDEIINYVQSLQ 223
                8**************************....9*******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.86E-10170227No hitNo description
SuperFamilySSF474591.14E-16170239IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.8E-17172241IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.535172222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.7E-7176223IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.2E-10178228IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MFRLIMDKET EETLNCLLPF GNGSDAMMIS DLIGRFCDTQ EISPLSLHSF SENFPIRFPY  60
PPQFGPNQVL ESQPTTQESN KSSLLDPGSV SGTAKTKHNA RKRKSISTGS EKESPASSSL  120
TASNSKISEE KSATVAGKRS KQNETEKNEN KNDEKPPEPF KDYIHVRARR GQATDSHSIA  180
ERVRREKISE RMKLLQNLVP GCNRITGKAV MLDEIINYVQ SLQRQVEFLS MKLATINSRT  240
EFNANAILSA EMLQLGESLS QSISCSEASF PSGYFAIGKS IPSEGFVQAE AATAFWENDL  300
QSLVQMGFRD SQQQSIINCS EPTIQMKLEP ER
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006414788.11e-171hypothetical protein EUTSA_v10025750mg
SwissprotQ9LK481e-144BH077_ARATH; Transcription factor bHLH77
TrEMBLV4P9A41e-171V4P9A4_EUTSA; Uncharacterized protein
STRINGBra037059.1-P1e-155(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM74062039
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23690.11e-123bHLH family protein