PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp6g14000
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
Family bHLH
Protein Properties Length: 208aa    MW: 23525.8 Da    PI: 10.0088
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp6g14000genomethellungiellaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.74.2e-082879255
               HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
        HLH  2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
               +  h  +Er+RR+++   f+ Lr +lP       ++K   ++ +  Av +Ik+ q
  Tp6g14000 28 KLLHRNIERQRRQEMAILFASLRNHLPLqY---IKGKRAMSDQVNGAVSFIKDTQ 79
               567999**********************66...99999999**********9866 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.37E-1123101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.17E-62483No hitNo description
PROSITE profilePS5088811.0642678IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-52879IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-72896IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
MEHCNNPIKK RHQSYMSQER DETKTEKKLL HRNIERQRRQ EMAILFASLR NHLPLQYIKG  60
KRAMSDQVNG AVSFIKDTQT RIHGLAARRD ELKREIGPIF SDHSSKTGSG SGNGSSRSDS  120
ASILVQPCVS GIEVVVNSSV SGVEASPLSR VLEVLHEQGL EVISSLTARV NERFMYTIQV  180
KVYSFVSFNL TWLQQKLIEE LLHSSKGY
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006401909.11e-109hypothetical protein EUTSA_v10014694mg
SwissprotQ9FLI01e-102BH120_ARATH; Transcription factor bHLH120
TrEMBLV4LLM01e-109V4LLM0_EUTSA; Uncharacterized protein
STRINGAT5G51790.11e-99(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM29682767
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.11e-87bHLH family protein