PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp3g27600
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
Family GeBP
Protein Properties Length: 525aa    MW: 59115.2 Da    PI: 9.7662
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp3g27600genomethellungiellaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57357.73.3e-183674322998
     DUF573  29 spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 
                sp  d  +f e vk+sisf++++sql+eKir+LK+Kfk++++k    + ++fs+++d  +fe+sk iWgs
  Tp3g27600 367 SPGRDRIGFQESVKSSISFEFTTSQLIEKIRSLKRKFKRNESK----EVVTFSRPDDLTCFEISKEIWGS 432
                67789999**********************************9....999******************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045047.9E-15367431IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 525 aa     Download sequence    Send to blast
MKPKKPILAC TREEPPRIYR FCGRTIGNGG GSSVKRDRDA RAEMVKRISE GDEANHTAKS  60
FVAEKKKNLK CPFKILMAKK QTKPMQQPPS EAAQVETSEE HEELVKTPTE IVAVSLAGKQ  120
AFGSDNETEK ITSVVKSKKN KKRSKKEAHT SAAVALPKKK SKTMEEPPSE EEEQVPMKEE  180
ESGGEHRDPI ETSTEIVAVS VVGKQASGLD TETEKIAYVV KSKKKKKKKR SKKSKTMEQP  240
PSEEEEQVSM EEEESGGEHK EPVETPTEIV AVSVAGKQAS GSENKTEKIA SVAKSKQNKK  300
RSKKEAHTSA AVALSKKKSK SMEEPPRKEE EQVSMVEGEQ KETKLHHLRQ SFQPPESKIP  360
VQIRLKSPGR DRIGFQESVK SSISFEFTTS QLIEKIRSLK RKFKRNESKE VVTFSRPDDL  420
TCFEISKEIW GSKVDEEKEK EDEEEDKEEE GEEEGWFENS FLVGKVSSFG LGEKTVKKGW  480
SLVPKERKKK IEHKLKLFEK ESNKFVMVKI DIVHDGISAI VKYTS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1223229KKKKKKR
2223232KKKKKKRSKK
3224232KKKKKRSKK
4225232KKKKRSKK
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM31328181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00610.15e-16DNA-binding storekeeper protein-related transcriptional regulator