PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010559051.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family G2-like
Protein Properties Length: 297aa    MW: 32627.2 Da    PI: 5.9428
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010559051.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1084.9e-341973155
         G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  XP_010559051.1 19 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 73
                    79****************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.4851676IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.0E-321874IPR009057Homeodomain-like
SuperFamilySSF466897.17E-181873IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-251974IPR006447Myb domain, plants
PfamPF002491.1E-92172IPR001005SANT/Myb domain
PfamPF143791.3E-23104149IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    Send to blast
MEPINGGNNV NSNPSLASKQ RLRWTHELHE RFVDAVAQLG GPDRATPKGV LRVMGVQGLT  60
IYHVKSHLQK YRLAKYLPDS SSEGKRTDKK ESVDTLSGLD GSSQITEALK LQMEVQKRLH  120
EQLEVQRQLQ LRIEAQGKYL KKIIEEQQRV NGVLGETSAP GTSDNFPERD NNNDPSTPAP  180
TSESPIQDKS GKECGQEKSL SLDESLSSYR EPLTPDSGFD YGSTRESPRG EERSSKKPRV  240
SADMVMVPPI LESGLNSSYH ETNPAFLLKG QFDHPSSGSL VGGSEDGLDK VSSGENL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010559048.10.0PREDICTED: probable transcription factor KAN2
RefseqXP_010559049.10.0PREDICTED: probable transcription factor KAN2
RefseqXP_010559051.10.0PREDICTED: probable transcription factor KAN2
RefseqXP_010559052.10.0PREDICTED: probable transcription factor KAN2
RefseqXP_010559053.10.0PREDICTED: probable transcription factor KAN2
RefseqXP_010559054.10.0PREDICTED: probable transcription factor KAN2
RefseqXP_010559055.10.0PREDICTED: probable transcription factor KAN2
TrEMBLD7LQZ51e-144D7LQZ5_ARALL; Myb family transcription factor
STRINGfgenesh2_kg.5__3__AT2G01060.11e-143(Arabidopsis lyrata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.11e-122G2-like family protein